miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42063_osa-MIR437:mirbase
          Length = 213

 Score = 85.7 bits (43), Expect = 1e-17
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 157 atttttcaataaacttggtcaaagttacagaattttgacttaggacaaaactaaa 211
           ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgacttaggacaaaactaaa 189



 Score = 69.9 bits (35), Expect = 8e-13
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| |||||||||||||||||||||
Sbjct: 176 taagtcaaacttctctaactttgaccaagtttatagaaa 138



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 72/82 (87%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                       
Query: 132 atttatttgg-attatagatgttaat-atttttcaataaacttggtcaaagttacagaat 189
           |||||||||| ||| ||||||||||| ||||| | | ||||||||||||||| | |||||
Sbjct: 107 atttatttggtattttagatgttaattattttactacaaacttggtcaaagtaaaagaat 48

                                 
Query: 190 tttgacttaggacaaaactaaa 211
           |||||||||  |||||||||||
Sbjct: 47  tttgacttacaacaaaactaaa 26




>42606_sbi-MIR437f:mirbase
          Length = 174

 Score = 83.8 bits (42), Expect = 5e-17
 Identities = 115/135 (85%), Gaps = 7/135 (5%)
 Strand = Plus / Minus

                                                                       
Query: 28  taagtcaaacttctctagctttgaccaagtttatag-aaagtgcgccaaaatcgacagca 86
           ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||   || ||
Sbjct: 173 taagtcaaacttctctaactttgaccaagtttatagaaaagtgcaccaagat---caaca 117

                                                                       
Query: 87  tcaaattggtttaattaaatccatctt--aatatatcttgacagtacatttatttgg-at 143
            |||||| |||| |||||||||| | |  ||||| |||||| ||| ||||||||||| ||
Sbjct: 116 acaaattagtttcattaaatccaacatgaaatatgtcttgatagtgcatttatttggtat 57

                          
Query: 144 tatagatgttaatat 158
           | |||||||||||||
Sbjct: 56  tgtagatgttaatat 42



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 159 ttttcaataaacttggtcaaagttacagaattttgacttag 199
           ||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 134 ttttctataaacttggtcaaagttagagaagtttgacttag 174




>42607_sbi-MIR437g:mirbase
          Length = 176

 Score = 69.9 bits (35), Expect = 8e-13
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| |||||||||||||||||||||
Sbjct: 175 taagtcaaacttctctaactttgaccaagtttatagaaa 137



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 159 ttttcaataaacttggtcaaagttacagaattttgacttag 199
           ||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 136 ttttctataaacttggtcaaagttagagaagtttgacttag 176




>42619_sbi-MIR437t:mirbase
          Length = 170

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| |||||||||||||||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttatagaaa 133



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 157 atttttcaataaacttggtcaaagttacagaattttgactt 197
           ||||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 31 gtcaaacttctctagctttgaccaagtt 58
          ||||||||| |||| |||||||||||||
Sbjct: 1  gtcaaacttgtctatctttgaccaagtt 28




>42615_sbi-MIR437p:mirbase
          Length = 188

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 158 tttttcaataaacttggtcaaagttacagaattttgacttag 199
           |||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 147 tttttcaataaacttggtcaaagttagagaagtttgacttag 188



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 187 taagtcaaacttctctaactttgaccaagtttattgaaa 149




>42602_sbi-MIR437b:mirbase
          Length = 171

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| |||||||||||||||||||||
Sbjct: 171 aagtcaaacttctctaactttgaccaagtttatagaaa 134



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 157 atttttcaataaacttggtcaaagttacagaattttgactt 197
           ||||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171




>42609_sbi-MIR437j:mirbase
          Length = 172

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                       
Query: 31 gtcaaacttctctagctttgaccaagtttatagaaagtgcgccaa 75
          |||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 1  gtcaaacttctctaactttgaccaagtttatagaaaatgcaccaa 45



 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 159 ttttcaataaacttggtcaaagttacagaattttgac 195
           ||||| ||||||||||||||||||| |||| ||||||
Sbjct: 37  ttttctataaacttggtcaaagttagagaagtttgac 1



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 73/87 (83%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                       
Query: 114 aatatatcttgacagtacatttatttgga-ttatagatgttaat--atttttcaataaac 170
           ||||| |||||| || ||||||||||| | || |||||||||||  ||||||  | ||||
Sbjct: 86  aatatgtcttgatagcacatttatttgtacttgtagatgttaatgtattttttgaaaaac 145

                                      
Query: 171 ttggtcaaagttacagaattttgactt 197
            |||||||||||| |||| ||||||||
Sbjct: 146 atggtcaaagttagagaagtttgactt 172



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 29  aagtcaaacttctctagctttgaccaagttt 59
           |||||||||||||||| ||||||||| ||||
Sbjct: 172 aagtcaaacttctctaactttgaccatgttt 142




>42608_sbi-MIR437i:mirbase
          Length = 170

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 140/171 (81%), Gaps = 5/171 (2%)
 Strand = Plus / Minus

                                                                       
Query: 29  aagtcaaacttctctagctttgaccaagtttatag-aaagtgcgccaaaatcgacagcat 87
           |||||||||||||||| ||||||| |||||||||| ||| ||| |||  ||| ||| |||
Sbjct: 170 aagtcaaacttctctaactttgacaaagtttatagaaaaatgcaccattatctacaccat 111

                                                                       
Query: 88  caaattggtttaattaaatccatcttaatatatcttgacagtacatttatttgg-attat 146
           | |||| ||||  ||| ||||| | | | || |||||| ||||||||||||||| | |  
Sbjct: 110 c-aattagttttgttagatccaccatcaaatgtcttgatagtacatttatttggtactga 52

                                                              
Query: 147 agatgttaatat--ttttcaataaacttggtcaaagttacagaattttgac 195
           ||||||||||||   |||| | ||||||||||||||||| |||| ||||||
Sbjct: 51  agatgttaatataactttctagaaacttggtcaaagttaaagaagtttgac 1



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 31 gtcaaacttctctagctttgaccaagtttatagaaagt 68
          ||||||||||| || |||||||||||||| ||||||||
Sbjct: 1  gtcaaacttctttaactttgaccaagtttctagaaagt 38




>42617_sbi-MIR437r:mirbase
          Length = 180

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 179 taagtcaaacttctctaactttggccaagtttatagaaa 141




>42610_sbi-MIR437k:mirbase
          Length = 172

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 171 taagtcaaacttctctaactttgaccaagtttttagaaa 133



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 155 atatttttcaataaacttggtcaaagttacagaattttgacttag 199
           ||||||||| | ||||||||||||||||| |||| ||||||||||
Sbjct: 128 atatttttctaaaaacttggtcaaagttagagaagtttgacttag 172



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 31 gtcaaacttctctagctttgaccaagtttatagaaa 66
          |||||||||||||| ||||||||||  |||||||||
Sbjct: 3  gtcaaacttctctaactttgaccaaacttatagaaa 38



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 156 tatttttcaataaacttggtcaaagttacagaattttgac 195
           |||||||| ||||  ||||||||||||| |||| ||||||
Sbjct: 42  tatttttctataagtttggtcaaagttagagaagtttgac 3




>42621_sbi-MIR437v:mirbase
          Length = 114

 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| ||||| |||||||||||||||
Sbjct: 114 aagtcaaacttctctaactttgtccaagtttatagaaa 77




>42620_sbi-MIR437u:mirbase
          Length = 164

 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| |||| ||||||||||||||||
Sbjct: 164 aagtcaaacttctctaactttcaccaagtttatagaaa 127



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 156 tatttttcaataaacttggtcaaagttacagaattttgactt 197
           |||||||| ||||||||||| ||||||| |||| ||||||||
Sbjct: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164




>42613_sbi-MIR437n:mirbase
          Length = 182

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaa 66
           ||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 181 taagtcaaacttctctaactttaaccaagtttgtagaaa 143



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 46 ctttgaccaagtttatagaaa 66
          |||||||||||||||||||||
Sbjct: 18 ctttgaccaagtttatagaaa 38



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 159 ttttcaataaacttggtcaaagtt 182
           ||||| ||||||||||||||||||
Sbjct: 39  ttttctataaacttggtcaaagtt 16




>42605_sbi-MIR437e:mirbase
          Length = 101

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 29  aagtcaaacttctctagctttgaccaagttt 59
           |||||||||||||||| ||||||||||||||
Sbjct: 101 aagtcaaacttctctaactttgaccaagttt 71



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 167 aaacttggtcaaagttacagaattttgactt 197
           ||||||||||||||||| |||| ||||||||
Sbjct: 71  aaacttggtcaaagttagagaagtttgactt 101




>42604_sbi-MIR437d:mirbase
          Length = 136

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 29  aagtcaaacttctctagctttgaccaagtttatag 63
           |||||||||||||||| |||| |||||||||||||
Sbjct: 134 aagtcaaacttctctaactttaaccaagtttatag 100



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 165 ataaacttggtcaaagttacagaattttgactt 197
           ||||||||||| ||||||| |||| ||||||||
Sbjct: 102 ataaacttggttaaagttagagaagtttgactt 134




>42622_sbi-MIR437w:mirbase
          Length = 173

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| |||| ||||||||| ||||||
Sbjct: 173 aagtcaaacttctctaactttcaccaagtttttagaaa 136




>42611_sbi-MIR437l:mirbase
          Length = 170

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| ||||| |||||||| ||||||
Sbjct: 170 aagtcaaacttctctaactttggccaagtttttagaaa 133



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 47/54 (87%), Gaps = 2/54 (3%)
 Strand = Plus / Plus

                                                                 
Query: 146 tagatgtta--atatttttcaataaacttggtcaaagttacagaattttgactt 197
           |||||||||  ||||||||| | |||||||| |||||||| |||| ||||||||
Sbjct: 117 tagatgttaatatatttttctaaaaacttggccaaagttagagaagtttgactt 170




>42475_ssp-MIR437a:mirbase
          Length = 175

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 29 aagtcaaacttctctagctttgaccaagtttatagaaa 66
          ||||||||| |||||| |||||| ||||||||||||||
Sbjct: 1  aagtcaaacctctctaactttgatcaagtttatagaaa 38



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 29  aagtcaaacttctctagctttgaccaagtttatagaaa 66
           |||||||||||||||| |||||| ||||||| ||||||
Sbjct: 175 aagtcaaacttctctaactttgatcaagtttttagaaa 138




>42616_sbi-MIR437q:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 28  taagtcaaacttctctagctttgaccaagtttatagaaag 67
           ||||||||||||||||| |||| ||||| | |||||||||
Sbjct: 159 taagtcaaacttctctaacttttaccaactctatagaaag 120




>42614_sbi-MIR437o:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 28  taagtcaaacttctctagctttgaccaagttt 59
           ||||||||||||||||| ||||||| ||||||
Sbjct: 174 taagtcaaacttctctaactttgactaagttt 143




>42476_ssp-MIR437b:mirbase
          Length = 172

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 31  gtcaaacttctctagctttgaccaagtttata 62
           ||||||||| |||| |||||||||||||||||
Sbjct: 170 gtcaaacttgtctaactttgaccaagtttata 139



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 155 atatttttcaataaacttggtcaaagtta 183
           ||||||||  |||||||||||||||||||
Sbjct: 130 atatttttgtataaacttggtcaaagtta 158




>42618_sbi-MIR437s:mirbase
          Length = 176

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 29 aagtcaaacttctctagctttgaccaagtttatagaaa 66
          ||||||||||||| || ||||| ||| |||||||||||
Sbjct: 1  aagtcaaacttctttaactttgtccaggtttatagaaa 38



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  taagtcaaacttctctagctttgacc 53
           ||||||||||||||||| ||||||||
Sbjct: 175 taagtcaaacttctctaactttgacc 150




>42612_sbi-MIR437m:mirbase
          Length = 174

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 37/41 (90%), Gaps = 2/41 (4%)
 Strand = Plus / Minus

                                                    
Query: 28  taagtcaaacttctctagc--tttgaccaagtttatagaaa 66
           ||||||||||||||||| |  ||||||||||||| ||||||
Sbjct: 173 taagtcaaacttctctaactttttgaccaagtttttagaaa 133




>41876_far-MIR437:mirbase
          Length = 160

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 172 tggtcaaagttacagaattttgacttaggacaaaacta 209
           ||||||||  || |||| ||||||||||||||||||||
Sbjct: 36  tggtcaaacatagagaagtttgacttaggacaaaacta 73




>42601_sbi-MIR437a:mirbase
          Length = 190

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 28  taagtcaaacttctctagctttgac 52
           ||||||||||||||||| |||||||
Sbjct: 189 taagtcaaacttctctaactttgac 165




>41838_bdi-MIR5169:mirbase
          Length = 210

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 155 atatttttcaataaacttggtcaaa 179
           ||||||||| |||||||||||||||
Sbjct: 153 atatttttctataaacttggtcaaa 177



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  tttgaccaagtttatagaaa 66
           ||||||||||||||||||||
Sbjct: 177 tttgaccaagtttatagaaa 158




>42631_sbi-MIR1435a:mirbase
          Length = 287

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  ctttgaccaagtttatagaaag-tgcgccaaaatcgacagcatcaaattggtttaattaa 104
           ||||||||||||||| |||||| |||  ||| ||| ||| |||||| || |||| |||||
Sbjct: 227 ctttgaccaagtttacagaaagatgcatcaacatctacaacatcaagtttgtttcattaa 168

               
Query: 105 atcc 108
           ||||
Sbjct: 167 atcc 164