miRNEST 2.0, an integrative microRNA resource :: BLAST
>40108_ath-MIR408:mirbase
Length = 218
Score = 129 bits (65), Expect = 5e-31
Identities = 95/104 (91%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 4 gagagagagacagggaacaagcagagcatggatcgagtttttaccaaaacatcaaatgac 63
||||||||||||||||||||||||||||||||| |||||| || ||||||| ||| |||
Sbjct: 44 gagagagagacagggaacaagcagagcatggattgagttt--actaaaacattaaacgac 101
Query: 64 tatgtttggtctcttcccatgcactgcctcttccctggctccct 107
| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggctccct 145
>39897_aly-MIR408:mirbase
Length = 211
Score = 127 bits (64), Expect = 2e-30
Identities = 94/103 (91%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 5 agagagagacagggaacaagcagagcatggatcgagtttttaccaaaacatcaaatgact 64
|||||||||||||||||||||||||||||||| |||||| || ||||||| ||| ||||
Sbjct: 42 agagagagacagggaacaagcagagcatggattgagttt--actaaaacattaaacgact 99
Query: 65 atgtttggtctcttcccatgcactgcctcttccctggctccct 107
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 100 ctgttttgtctctacccatgcactgcctcttccctggctccct 142
>41683_vvi-MIR408:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 74 ctcttcccatgcactgcctcttccctggctc 104
|||| ||||||||||||||||||||||||||
Sbjct: 69 ctctacccatgcactgcctcttccctggctc 99
>41252_csi-MIR408:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctc 104
|||||||||||||||||||||||||||
Sbjct: 116 tcccatgcactgcctcttccctggctc 142
>41463_ptc-MIR408:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 74 ctcttcccatgcactgcctcttccctggct 103
|||| |||||||||||||||||||||||||
Sbjct: 68 ctctacccatgcactgcctcttccctggct 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 ctcttcccatgcactgcctcttccctggct 103
||||| ||||||||||||||||||||||||
Sbjct: 30 ctctttccatgcactgcctcttccctggct 1
>42464_sof-MIR408c:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctccc 106
|||| ||||||||||||||||||||||||
Sbjct: 243 tcccctgcactgcctcttccctggctccc 271
>42463_sof-MIR408b:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctccc 106
|||| ||||||||||||||||||||||||
Sbjct: 243 tcccctgcactgcctcttccctggctccc 271
>42462_sof-MIR408a:mirbase
Length = 283
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctccc 106
|||| ||||||||||||||||||||||||
Sbjct: 240 tcccctgcactgcctcttccctggctccc 268
>42052_osa-MIR408:mirbase
Length = 213
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctccc 106
|||| ||||||||||||||||||||||||
Sbjct: 149 tcccctgcactgcctcttccctggctccc 177
>42829_zma-MIR408:mirbase
Length = 191
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctcc 105
|||| |||||||||||||||||||||||
Sbjct: 148 tcccctgcactgcctcttccctggctcc 175
>42647_tae-MIR408:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 tgcactgcctcttccctggctccc 106
||||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctccc 160
>42465_sof-MIR408d:mirbase
Length = 215
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 tgcactgcctcttccctggctccc 106
||||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctccc 200
>40405_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 catgcactgcctcttccctggctc 104
||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctc 103
>40404_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 catgcactgcctcttccctggctc 104
||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctc 103
>42830_zma-MIR408b:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctc 104
|||| ||||||||||||||||||||||
Sbjct: 121 tcccctgcactgcctcttccctggctc 147
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggctc 104
|||| ||||||||||||||||||||||
Sbjct: 222 tcccctgcactgcctcttccctggctc 248
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 catgcactgcctcttccctggct 103
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 atgcactgcctcttccctggctc 104
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>42600_sbi-MIR408:mirbase
Length = 205
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 78 tcccatgcactgcctcttccctggct 103
|||| |||||||||||||||||||||
Sbjct: 180 tcccctgcactgcctcttccctggct 205
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgcactgcctcttccctggctc 104
||||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggctc 180
>40391_rco-MIR408:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 ctcttcccatgcactgcctcttccctggct 103
|||| ||| |||||||||||||||||||||
Sbjct: 59 ctctacccctgcactgcctcttccctggct 88
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 atgcactgcctcttccctggct 103
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>42466_sof-MIR408e:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 tgcactgcctcttccctggctccc 106
||||||| ||||||||||||||||
Sbjct: 245 tgcactgactcttccctggctccc 268