miRNEST 2.0, an integrative microRNA resource :: BLAST
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 4e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccctc 278
||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccctc 143
Score = 44.1 bits (22), Expect = 6e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 21 aaagggtttcctgcagatttctttggcattctgtccacctcc 62
|||||||||| | |||| || ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagtttattggcattctgtccacctcc 57
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 4e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccctc 278
||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccctc 143
Score = 44.1 bits (22), Expect = 6e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 21 aaagggtttcctgcagatttctttggcattctgtccacctcc 62
|||||||||| | |||| || ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagtttattggcattctgtccacctcc 57
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 4e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccctc 278
||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccctc 143
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 21 aaagggtttcctgcagatttctttggcattctgtccacctcc 62
|||||||||| | |||| || |||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagttttttggcattctgtccacctcc 57
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 4e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccctc 278
||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccctc 143
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 21 aaagggtttcctgcagatttctttggcattctgtccacctcc 62
|||||||||| | |||| || |||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagttttttggcattctgtccacctcc 57
>40471_gma-MIR394a:mirbase
Length = 157
Score = 54.0 bits (27), Expect = 6e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttgg 258
||||||||| |||||||||||| ||||||||||||
Sbjct: 98 tggaggtgggcatactgtcaactgagctctgttgg 132
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 39 ttggcattctgtccacctcc 58
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 52.0 bits (26), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaa 273
||||||||| ||||||| |||| | |||||||||| |||||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgtgctctgttggcttctctttgtaaaa 154
Score = 46.1 bits (23), Expect = 1e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 ttcatggcggtttaataaagggtttcctgcagatttctttggcattctgtccacctccc 63
||||||| |||||| |||||| ||| | |||| || |||||||||||||||||||||
Sbjct: 5 ttcatgggggtttagcaaagggcttcttacagagtttattggcattctgtccacctccc 63
>42000_osa-MIR394:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 ttctttggcattctgtccacctcc 62
||||||||||||||||||||||||
Sbjct: 10 ttctttggcattctgtccacctcc 33
>41776_bdi-MIR394:mirbase
Length = 200
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tctttggcattctgtccacctcc 62
|||||||||||||||||||||||
Sbjct: 50 tctttggcattctgtccacctcc 72
Score = 42.1 bits (21), Expect = 2e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccc 276
||||||||| ||||||| ||| |||||| ||| || || |||||||||||||
Sbjct: 125 tggaggtgggcatactgccaatggagctgtgtaggcttccctttgtaaaaccc 177
>41239_csi-MIR394:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttgg 258
||||||||| ||||||| |||| ||||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgagctctgttgg 139
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 17 ttggcattctgtccacctcc 36
>40078_ath-MIR394b:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tctttggcattctgtccacctcc 62
|||||||||||||||||||||||
Sbjct: 11 tctttggcattctgtccacctcc 33
>40077_ath-MIR394a:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tctttggcattctgtccacctcc 62
|||||||||||||||||||||||
Sbjct: 11 tctttggcattctgtccacctcc 33
>39868_aly-MIR394b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tctttggcattctgtccacctcc 62
|||||||||||||||||||||||
Sbjct: 38 tctttggcattctgtccacctcc 60
Score = 40.1 bits (20), Expect = 0.001
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 225 ggaggtggacatactgtcaacggagctctgttggtatctctttgtaaaaccc 276
||||||||||||| || |||| ||| |||||| | | ||||||||||||||
Sbjct: 100 ggaggtggacatattgccaacagagatctgttagggtttctttgtaaaaccc 151
>39867_aly-MIR394a:mirbase
Length = 220
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tctttggcattctgtccacctcc 62
|||||||||||||||||||||||
Sbjct: 65 tctttggcattctgtccacctcc 87
>42790_zma-MIR394b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccct 64
||||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccct 42
>40472_gma-MIR394b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagctctgttg 257
||||||||| |||||||||||| ||| |||||||
Sbjct: 71 tggaggtgggcatactgtcaactgagttctgttg 104
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 13 ttggcattctgtccacctcc 32
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 tttggcattctgtccacctcc 62
|||||||||||||||||||||
Sbjct: 10 tttggcattctgtccacctcc 30
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccc 63
|||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctccc 31
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 tttggcattctgtccacctcc 62
|||||||||||||||||||||
Sbjct: 10 tttggcattctgtccacctcc 30
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 tttggcattctgtccacctcc 62
|||||||||||||||||||||
Sbjct: 20 tttggcattctgtccacctcc 40
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccc 63
|||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 tttggcattctgtccacctcc 62
|||||||||||||||||||||
Sbjct: 34 tttggcattctgtccacctcc 54
>40402_ahy-MIR394:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 tttggcattctgtccacctcc 62
|||||||||||||||||||||
Sbjct: 21 tttggcattctgtccacctcc 41
>42789_zma-MIR394a:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 2 ttggcattctgtccacctcc 21
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
Score = 40.1 bits (20), Expect = 0.001
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 224 tggaggtggacatactgtcaacggagct 251
||||||||||||||||| ||| ||||||
Sbjct: 71 tggaggtggacatactgccaatggagct 98
