miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29403_hsa-mir-3622a:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 60
Query: 61 cccatgcctgtgcaccctctatt 83
|||||||||||||||||||||||
Sbjct: 61 cccatgcctgtgcaccctctatt 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgagg-cagggagctgagctcacctgacc 59
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 83 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgc-ctcacctgagc 25
Query: 60 tcccatgcctgtgcaccctctatt 83
|||| |||||||||||||||||||
Sbjct: 24 tcccgtgcctgtgcaccctctatt 1
>29405_hsa-mir-3622b:mirbase
Length = 95
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 32
Query: 61 cccatgcctgtgcaccctctatt 83
|||||||||||||||||||||||
Sbjct: 31 cccatgcctgtgcaccctctatt 9
Score = 56.0 bits (28), Expect = 4e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgag-gcagggagctgagctcacctgacc 59
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctg-cctcacctgagc 67
Query: 60 tcccatgcctgtgcaccctctatt 83
|||| |||||||||||||||||||
Sbjct: 68 tcccgtgcctgtgcaccctctatt 91
>29406_hsa-mir-3622b:mirbase
Length = 95
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aatagagggtgcacaggcacgggagctcaggtgaggcagggagctgagctcacctgacct 32
Query: 61 cccatgcctgtgcaccctctatt 83
|||||||||||||||||||||||
Sbjct: 31 cccatgcctgtgcaccctctatt 9
Score = 56.0 bits (28), Expect = 4e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 aatagagggtgcacaggcacgggagctcaggtgag-gcagggagctgagctcacctgacc 59
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctg-cctcacctgagc 67
Query: 60 tcccatgcctgtgcaccctctatt 83
|||| |||||||||||||||||||
Sbjct: 68 tcccgtgcctgtgcaccctctatt 91
