miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29405_hsa-mir-3622b:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 agtgatataatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgatataatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctca 60
Query: 61 cctgagctcccgtgcctgtgcaccctctattggct 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgagctcccgtgcctgtgcaccctctattggct 95
Score = 56.0 bits (28), Expect = 5e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgc-ctcacctgagc 67
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 91 aatagagggtgcacaggcacgggagctcaggtgagg-cagggagctgagctcacctgacc 33
Query: 68 tcccgtgcctgtgcaccctctatt 91
|||| |||||||||||||||||||
Sbjct: 32 tcccatgcctgtgcaccctctatt 9
>29403_hsa-mir-3622a:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctcacctgagct 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctcacctgagct 24
Query: 69 cccgtgcctgtgcaccctctatt 91
|||||||||||||||||||||||
Sbjct: 23 cccgtgcctgtgcaccctctatt 1
Score = 56.0 bits (28), Expect = 5e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctg-cctcacctgagc 67
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 1 aatagagggtgcacaggcacgggagctcaggtgag-gcagggagctgagctcacctgacc 59
Query: 68 tcccgtgcctgtgcaccctctatt 91
|||| |||||||||||||||||||
Sbjct: 60 tcccatgcctgtgcaccctctatt 83
>29404_hsa-mir-3622a:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctcacctgagct 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctgcctcacctgagct 24
Query: 69 cccgtgcctgtgcaccctctatt 91
|||||||||||||||||||||||
Sbjct: 23 cccgtgcctgtgcaccctctatt 1
Score = 56.0 bits (28), Expect = 5e-09
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 9 aatagagggtgcacaggcatgggaggtcaggtgagctcagctccctg-cctcacctgagc 67
||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||||| |
Sbjct: 1 aatagagggtgcacaggcacgggagctcaggtgag-gcagggagctgagctcacctgacc 59
Query: 68 tcccgtgcctgtgcaccctctatt 91
|||| |||||||||||||||||||
Sbjct: 60 tcccatgcctgtgcaccctctatt 83
