miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29634_hsa-mir-4436b:mirbase
          Length = 91

 Score =  121 bits (61), Expect = 8e-29
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1  gcctcacttttccacttatgcctgccctgcccctcgaatctgctccacgatttgggcagg 60
          ||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 88 gcctcacttgtccacttcttcctgccctgcccctcgaatctgctccaccatttgggcagg 29

                                   
Query: 61 acaggcagaagtggataagtgagga 85
           |||||||||||||| |||||||||
Sbjct: 28 gcaggcagaagtggacaagtgagga 4



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 2  cctcacttttccacttatgcctgccctgccc 32
          |||||||| ||||||| ||||||||||||||
Sbjct: 5  cctcacttgtccacttctgcctgccctgccc 35




>29635_hsa-mir-4436b:mirbase
          Length = 91

 Score =  121 bits (61), Expect = 8e-29
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1  gcctcacttttccacttatgcctgccctgcccctcgaatctgctccacgatttgggcagg 60
          ||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 88 gcctcacttgtccacttcttcctgccctgcccctcgaatctgctccaccatttgggcagg 29

                                   
Query: 61 acaggcagaagtggataagtgagga 85
           |||||||||||||| |||||||||
Sbjct: 28 gcaggcagaagtggacaagtgagga 4



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 2  cctcacttttccacttatgcctgccctgccc 32
          |||||||| ||||||| ||||||||||||||
Sbjct: 5  cctcacttgtccacttctgcctgccctgccc 35