miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29634_hsa-mir-4436b:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 gtgtcctcacttgtccacttctgcctgccctgcccaaatggtggagcagattcgaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtcctcacttgtccacttctgcctgccctgcccaaatggtggagcagattcgaggggc 60
Query: 61 agggcaggaagaagtggacaagtgaggccat 91
|||||||||||||||||||||||||||||||
Sbjct: 61 agggcaggaagaagtggacaagtgaggccat 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 57 gggcagggcaggaagaagtggacaagtgagg 87
|||||||||||| ||||||||||||||||||
Sbjct: 35 gggcagggcaggcagaagtggacaagtgagg 5
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 cctcacttgtccacttctgcctgccctgccc 35
|||||||||||||||||| ||||||||||||
Sbjct: 87 cctcacttgtccacttcttcctgccctgccc 57
>29633_hsa-mir-4436a:mirbase
Length = 85
Score = 121 bits (61), Expect = 9e-29
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 4 tcctcacttgtccacttctgcctgccctgcccaaatggtggagcagattcgaggggcagg 63
||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 85 tcctcacttatccacttctgcctgtcctgcccaaatcgtggagcagattcgaggggcagg 26
Query: 64 gcaggaagaagtggacaagtgaggc 88
||||| | ||||||| |||||||||
Sbjct: 25 gcaggcataagtggaaaagtgaggc 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 cctcacttgtccacttctgcctgccctgccc 35
|||||||| ||||||| ||||||||||||||
Sbjct: 2 cctcacttttccacttatgcctgccctgccc 32
