miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41890_hvu-MIR171:mirbase
Length = 173
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 ggttctgattgagccgtgccaatatct 88
|||||||||||||||||||||||||||
Sbjct: 107 ggttctgattgagccgtgccaatatct 133
>42764_zma-MIR171d:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatctc 89
||||||||||||||||||||||||||
Sbjct: 79 ttctgattgagccgtgccaatatctc 104
>42640_tae-MIR171a:mirbase
Length = 130
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 gtggttctgattgagccgtgccaatatctc 89
|||| |||||||||||||||||||||||||
Sbjct: 82 gtggctctgattgagccgtgccaatatctc 111
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatctc 89
||||||||||||||||||||||||||
Sbjct: 111 ttctgattgagccgtgccaatatctc 136
>41984_osa-MIR171d:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatctc 89
||||||||||||||||||||||||||
Sbjct: 102 ttctgattgagccgtgccaatatctc 127
>42765_zma-MIR171e:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatct 88
|||||||||||||||||||||||||
Sbjct: 84 ttctgattgagccgtgccaatatct 108
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatct 88
|||||||||||||||||||||||||
Sbjct: 65 ttctgattgagccgtgccaatatct 89
>41985_osa-MIR171e:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 ttctgattgagccgtgccaatatct 88
|||||||||||||||||||||||||
Sbjct: 86 ttctgattgagccgtgccaatatct 110
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatct 88
||||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatct 122
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatct 88
||||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatct 116
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 95 tctgattgagccgtgccaatatc 117
>41874_far-MIR171:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 67 tctgattgagccgtgccaatatc 89
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctc 89
|||||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatctc 109
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctc 89
|||||||||||||||||||||||
Sbjct: 100 tgattgagccgtgccaatatctc 122
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 69 tctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 69 tctgattgagccgtgccaatatc 91
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 63 tctgattgagccgtgccaatatc 85
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 53 tctgattgagccgtgccaatatc 75
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 73 tctgattgagccgtgccaatatc 95
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctc 89
|||||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatctc 102
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctc 89
|||||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatctc 102
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctc 89
|||||||||||||||||||||||
Sbjct: 86 tgattgagccgtgccaatatctc 108
>40363_rco-MIR171e:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 57 tctgattgagccgtgccaatatc 79
>40361_rco-MIR171c:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 60 tctgattgagccgtgccaatatc 82
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctct 90
||||||||||||| ||||||||||||
Sbjct: 65 tctgattgagccgcgccaatatctct 90
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatct 88
||||||||||||||||||||||
Sbjct: 84 tgattgagccgtgccaatatct 105
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatct 88
||||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatct 101
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatct 88
||||||||||||||||||||||
Sbjct: 99 tgattgagccgtgccaatatct 120
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>42762_zma-MIR171b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatc 142
>41983_osa-MIR171c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>41982_osa-MIR171b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatctctc 91
||||||||||| |||||||||||||
Sbjct: 50 tgattgagccgcgccaatatctctc 74
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>41216_crt-MIR171:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatc 181
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 21 tgattgagccgtgccaatatc 1
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 121 tgattgagccgtgccaatatc 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40457_gma-MIR171c:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>40360_rco-MIR171b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatc 83
>40359_rco-MIR171a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>40322_bra-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 82 tctgattgagccgcgccaatatctc 106
>40318_bra-MIR171a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40291_bna-MIR171g:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 56 tctgattgagccgcgccaatatctc 80
>40290_bna-MIR171f:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 82 tctgattgagccgcgccaatatctc 106
>40289_bna-MIR171e:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40062_ath-MIR171c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>40060_ath-MIR171a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 86 tctgattgagccgcgccaatatctc 110
>40059_ath-MIR170:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||||| |||||||||
Sbjct: 57 tctgattgagccgtgtcaatatctc 81
>39851_aly-MIR171c:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatc 87
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>39849_aly-MIR171a:mirbase
Length = 198
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 128 tctgattgagccgcgccaatatctc 152
>39848_aly-MIR170:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgtgccaatatctc 89
||||||||||||||| |||||||||
Sbjct: 115 tctgattgagccgtgtcaatatctc 139
