miRNEST 2.0, an integrative microRNA resource :: BLAST
>39804_aly-MIR159a:mirbase
Length = 222
Score = 295 bits (149), Expect = 7e-81
Identities = 183/193 (94%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 8 gaagtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagc 67
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 17 gaagtagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagc 76
Query: 68 tatggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttg 126
||||||||||||||||||||| ||||| | | | ||||| | |||||||||||||||||
Sbjct: 77 tatggatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttg 136
Query: 127 catatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 catatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggg 196
Query: 187 agctctacatctt 199
|||||||||||||
Sbjct: 197 agctctacatctt 209
>40311_bra-MIR159a:mirbase
Length = 185
Score = 264 bits (133), Expect = 2e-71
Identities = 177/188 (94%), Gaps = 4/188 (2%)
Strand = Plus / Plus
Query: 9 aagtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 68
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
Query: 69 atggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgc 127
||| |||||||||||||||| ||||| | ||| |||||||||| ||||||||||||| |
Sbjct: 61 atgaatcccataagccctaatccttatatata--aaaaggattt-ggttatatggcttac 117
Query: 128 atatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggga 187
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 118 atatctcaggagctttaacttgccctttaattgcttttactcttctttggattgaaggga 177
Query: 188 gctctaca 195
||||||||
Sbjct: 178 gctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 260 bits (131), Expect = 4e-70
Identities = 175/186 (94%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 11 gtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 70
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcat 129
| |||||||||||||||| ||||| | ||| |||||||||| ||||||||||||| |||
Sbjct: 61 gaatcccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacat 117
Query: 130 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 189
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118 atctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagc 177
Query: 190 tctaca 195
||||||
Sbjct: 178 tctaca 183
>40016_ath-MIR159a:mirbase
Length = 184
Score = 256 bits (129), Expect = 6e-69
Identities = 173/185 (93%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 11 gtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 70
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcat 129
|||||||||||||||||| |||| | | ||||||||||| |||||||||| ||||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcat 119
Query: 130 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 179
Query: 190 tctac 194
|||||
Sbjct: 180 tctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 119 bits (60), Expect = 9e-28
Identities = 158/187 (84%), Gaps = 9/187 (4%)
Strand = Plus / Plus
Query: 13 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 72
|||||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 16 agagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgg 75
Query: 73 atcccataagccctaaccttaaacatagaaaaaggattttggttatatggcttgcatatc 132
||||||||| || || | ||| | || ||||||| || ||||| || ||||||
Sbjct: 76 atcccataaacctta---tcaaattcaaaataaggatt----ttttatggattccatatc 128
Query: 133 tcaggagctttaactt-gccctttaatggcttttactcttctttggattgaagggagctc 191
||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 129 tcaggagctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctc 187
Query: 192 tacatct 198
| |||||
Sbjct: 188 ttcatct 194
>40017_ath-MIR159b:mirbase
Length = 196
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 13 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 72
|||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 73 atcccataagcc 84
||||||||||||
Sbjct: 64 atcccataagcc 75
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 170 ttctttggattgaagggagctctacatctt 199
||||||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctacatctt 178
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctaca 195
|||||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctctaca 197
>41917_osa-MIR159a:mirbase
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatcttt 200
|||||||||||||||||||||| |||||||
Sbjct: 240 tctttggattgaagggagctctgcatcttt 269
>41916_osa-MIR159a:mirbase
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatcttt 200
|||||||||||||||||||||| |||||||
Sbjct: 240 tctttggattgaagggagctctgcatcttt 269
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctac 194
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctac 194
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>40338_rco-MIR159:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatct 198
||||||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctacatct 180
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tggcttgcatatctcaggagctt 142
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
>41918_osa-MIR159b:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatctt 199
|||||||||||||||||||||| ||||||
Sbjct: 156 tctttggattgaagggagctctgcatctt 184
>41868_far-MIR159:mirbase
Length = 200
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatctt 199
|||||||||||||||||||||| ||||||
Sbjct: 167 tctttggattgaagggagctctgcatctt 195
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatct 198
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 aagctgctaagctatggatcc 76
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 aagctgctaagctatggatcc 76
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>40397_ahy-MIR159:mirbase
Length = 197
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacat 196
||||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctacat 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 agctgctaagctatggatccca 78
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
>42691_zma-MIR159b:mirbase
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatctt 199
|||||||||||||||||||| ||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>42690_zma-MIR159a:mirbase
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 221 tctttggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>42453_sof-MIR159b:mirbase
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatctt 199
|||||||||||||||||||| ||||||
Sbjct: 11 tttggattgaagggagctctgcatctt 37
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctaca 195
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 tggcttgcatatctcaggagct 141
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctctaca 195
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctac 194
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
