miRNEST 2.0, an integrative microRNA resource :: BLAST
>40009_ath-MIR156h:mirbase
Length = 106
Score = 127 bits (64), Expect = 2e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 5 aaaatgttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgccct 64
||||||||||||||||||||||||||||| | |||||||||||| | | |||||||||||
Sbjct: 5 aaaatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgccct 64
Query: 65 tgtcgggagtgtgctctctttacttctg 92
||||||||||||||||||||| ||||||
Sbjct: 65 tgtcgggagtgtgctctctttccttctg 92
>39797_aly-MIR156h:mirbase
Length = 99
Score = 125 bits (63), Expect = 6e-30
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 6 aaatgttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgccctt 65
|||||||||||||||||||||||||||| | |||||||||||| | | ||||||||||||
Sbjct: 2 aaatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgccctt 61
Query: 66 gtcgggagtgtgctctctttacttctg 92
|||||||||||||||||||| ||||||
Sbjct: 62 gtcgggagtgtgctctctttccttctg 88
>40334_rco-MIR156e:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 7 aatgttgacagaagaaagagagcacaagccgggattag 44
||||||||||||||| ||||||||||| |||| |||||
Sbjct: 1 aatgttgacagaagagagagagcacaacccggcattag 38
>40430_gma-MIR156f:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 atgttgacagaagaaagagagcacaagccggga 40
|||||||||||||| ||||||||||| ||||||
Sbjct: 8 atgttgacagaagagagagagcacaacccggga 40
>40426_gma-MIR156b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 atgttgacagaagaaagagagcacaagccggga 40
|||||||||||||| ||||||||||| ||||||
Sbjct: 17 atgttgacagaagagagagagcacaacccggga 49
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 1e-06
Identities = 74/88 (84%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 8 atgttgacagaagaaagagagcacaagccgggattagcaaatataaagt-tttgcccttg 66
|||||||||||||| ||||||||||| |||| || ||| || | ||||| ||||| |||
Sbjct: 17 atgttgacagaagagagagagcacaacccggcatcagctaa-agaaagtctttgcttttg 75
Query: 67 tcgggagtgtgctctctttacttctgtc 94
| ||||||||||| ||| | ||||||||
Sbjct: 76 ttgggagtgtgctttctcttcttctgtc 103
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 aaatgttgacagaagaaagagagcacaa 33
|||||||||||||||| |||||||||||
Sbjct: 16 aaatgttgacagaagagagagagcacaa 43
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 aaatgttgacagaagaaagagagcacaa 33
|||||||||||||||| |||||||||||
Sbjct: 12 aaatgttgacagaagagagagagcacaa 39
>41204_aqc-MIR529:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 atgttgacagaagaaagagagcacaa 33
|||||||||||||| |||||||||||
Sbjct: 14 atgttgacagaagagagagagcacaa 39
>39728_smo-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagaaagagagcaca 32
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaa 33
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaa 43
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaa 168
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcacaa 33
||||||||||||| |||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaa 28
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgttgacagaagaaagagagcaca 32
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
