miRNEST 2.0, an integrative microRNA resource :: BLAST
>40009_ath-MIR156h:mirbase
Length = 106
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 6 aaaatgttgacagaagaaagagagcacaagccgggattagcaaaaagagagttttgccct 65
||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||
Sbjct: 5 aaaatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgccct 64
Query: 66 tgtcgggagtgtgctctctttacttctgccaccatcat 103
||||||||||||||||||||| ||||||||||||||||
Sbjct: 65 tgtcgggagtgtgctctctttccttctgccaccatcat 102
>39797_aly-MIR156h:mirbase
Length = 99
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 7 aaatgttgacagaagaaagagagcacaagccgggattagcaaaaagagagttttgccctt 66
|||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||
Sbjct: 2 aaatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgccctt 61
Query: 67 gtcgggagtgtgctctctttacttctgccaccatcatc 104
|||||||||||||||||||| |||||||||||||||||
Sbjct: 62 gtcgggagtgtgctctctttccttctgccaccatcatc 99
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 1e-09
Identities = 82/97 (84%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 9 atgttgacagaagaaagagagcacaagccgggattagcaaaaagagagt-tttgcccttg 67
|||||||||||||| ||||||||||| |||| || ||| ||||| ||| ||||| |||
Sbjct: 17 atgttgacagaagagagagagcacaacccggcatcagc-taaagaaagtctttgcttttg 75
Query: 68 tcgggagtgtgctctctttacttctgccaccatcatc 104
| ||||||||||| ||| | |||||| ||||||||||
Sbjct: 76 ttgggagtgtgctttctcttcttctgtcaccatcatc 112
>40334_rco-MIR156e:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 8 aatgttgacagaagaaagagagcacaagccgggattagcaaaaagagagttttgcccttg 67
||||||||||||||| ||||||||||| |||| ||||| |||||| |||||| |||
Sbjct: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaagag-tctttgcctttg 59
Query: 68 tcgggagtgtgctctct 84
| |||||||||||||||
Sbjct: 60 ttgggagtgtgctctct 76
>40430_gma-MIR156f:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 atgttgacagaagaaagagagcacaagccggga 41
|||||||||||||| ||||||||||| ||||||
Sbjct: 8 atgttgacagaagagagagagcacaacccggga 40
>40426_gma-MIR156b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 atgttgacagaagaaagagagcacaagccggga 41
|||||||||||||| ||||||||||| ||||||
Sbjct: 17 atgttgacagaagagagagagcacaacccggga 49
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 aaatgttgacagaagaaagagagcacaa 34
|||||||||||||||| |||||||||||
Sbjct: 16 aaatgttgacagaagagagagagcacaa 43
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 aaatgttgacagaagaaagagagcacaa 34
|||||||||||||||| |||||||||||
Sbjct: 12 aaatgttgacagaagagagagagcacaa 39
>41204_aqc-MIR529:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 atgttgacagaagaaagagagcacaa 34
|||||||||||||| |||||||||||
Sbjct: 14 atgttgacagaagagagagagcacaa 39
>39728_smo-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagaaagagagcaca 33
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaa 33
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaa 43
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaa 168
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcacaa 34
||||||||||||| |||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaa 28
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgttgacagaagaaagagagcaca 33
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
