miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41811_bdi-MIR1135:mirbase
          Length = 138

 Score =  127 bits (64), Expect = 3e-30
 Identities = 101/112 (90%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                       
Query: 22  actcactccagtcggaattacttgttgaaatattacgtgtatctagacggttttttacac 81
           |||| |||| ||||||||||||||| |||||||||| |||||||||||    ||||||||
Sbjct: 130 actccctccggtcggaattacttgtcgaaatattacatgtatctagac-acgttttacac 72

                                                               
Query: 82  atagatacgtccgtatttgggcaaatttgagacaagtaattccgatcggagg 133
           |||||||| ||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 71  atagatacatccgtatttgggcaaatttgagacaagtaataccggtcggagg 20



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 112 gacaagtaattccgatcggagggag 136
           ||||||||||||||| |||||||||
Sbjct: 105 gacaagtaattccgaccggagggag 129




>41809_bdi-MIR1122:mirbase
          Length = 180

 Score = 89.7 bits (45), Expect = 6e-19
 Identities = 70/76 (92%), Gaps = 3/76 (3%)
 Strand = Plus / Plus

                                                                       
Query: 48  gaaatattac--gtgtatctagacggttttttacacatagatacgtccgtatttgggcaa 105
           ||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 28  gaaatattacatgtgtatctagacg-ttttttacacatagatacatccgtatttggacaa 86

                           
Query: 106 atttgagacaagtaat 121
           ||||||||| ||||||
Sbjct: 87  atttgagacgagtaat 102




>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 107 tttgagacaagtaattccgatcggagggag 136
           |||| ||||||||||||||| |||||||||
Sbjct: 103 tttgtgacaagtaattccgaacggagggag 132




>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 112 gacaagtaattccgatcggagggag 136
           ||||||||||||||| |||||||||
Sbjct: 82  gacaagtaattccgaacggagggag 106