miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41763_bdi-MIR169k:mirbase
Length = 174
Score = 264 bits (133), Expect = 1e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 gccatctttgatagccaaggatgatttgcctgtaaaaccgattgtcgtcgcctctcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 gccatctttgatagccaaggatgatttgcctgtaaaaccgattgtcgtcgcctctcggtg 80
Query: 61 ccgttccaggcactcgaagggagggcggcagcaacaggttctatgggcaagtcagcctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ccgttccaggcactcgaagggagggcggcagcaacaggttctatgggcaagtcagcctgg 140
Query: 121 ctacccgagtacc 133
|||||||||||||
Sbjct: 141 ctacccgagtacc 153
>42673_tae-MIR1433:mirbase
Length = 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 gccatctttgatagccaaggatgatttgcctgtaaaac 38
|||||||| |||||||||||||||||||||||| ||||
Sbjct: 13 gccatcttcgatagccaaggatgatttgcctgtgaaac 50
>42217_osa-MIR1433:mirbase
Length = 129
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gccatctttgatagccaaggatgatttgcctgta 34
|||||||| |||||||||||||||||||||||||
Sbjct: 3 gccatcttcgatagccaaggatgatttgcctgta 36
>42543_sbi-MIR169o:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atagccaaggatgatttgcctgta 34
||||||||||||||||||||||||
Sbjct: 1 atagccaaggatgatttgcctgta 24
>41111_tcc-MIR169j:mirbase
Length = 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tttgatagccaaggatgatttgcctgta 34
|||||||||||||||||| |||||||||
Sbjct: 16 tttgatagccaaggatgacttgcctgta 43
>41980_osa-MIR169q:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 atctttgatagccaaggatgatttgcctgt 33
|||| |||||||||||||||| ||||||||
Sbjct: 106 atctctgatagccaaggatgacttgcctgt 77
>41975_osa-MIR169l:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 atctttgatagccaaggatgatttgcctgt 33
|||| |||||||||||||||| ||||||||
Sbjct: 3 atctctgatagccaaggatgacttgcctgt 32
>41759_bdi-MIR169g:mirbase
Length = 181
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 atctttgatagccaaggatgatttgcctgt 33
|||| |||||||||||||||| ||||||||
Sbjct: 48 atctctgatagccaaggatgacttgcctgt 77
>41366_ptc-MIR169l:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tttgatagccaaggatgatttgcctg 32
|||||||||||||||||| |||||||
Sbjct: 6 tttgatagccaaggatgacttgcctg 31
>41364_ptc-MIR169j:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tttgatagccaaggatgatttgcctg 32
|||||||||||||||||| |||||||
Sbjct: 6 tttgatagccaaggatgacttgcctg 31
>42540_sbi-MIR169l:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgatttgcctgt 33
|||||||||||||||| ||||||||
Sbjct: 1 tgatagccaaggatgacttgcctgt 25
>41757_bdi-MIR169e:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgatttgcctgt 33
|||||||||||||||| ||||||||
Sbjct: 29 tgatagccaaggatgacttgcctgt 53
>42752_zma-MIR169j:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgatttgcctgt 33
||||||||||||||| ||||||||
Sbjct: 19 gatagccaaggatgacttgcctgt 42
>42535_sbi-MIR169g:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgatttgcctgt 33
||||||||||||||| ||||||||
Sbjct: 19 gatagccaaggatgacttgcctgt 42
>41974_osa-MIR169k:mirbase
Length = 156
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgatttgcctgt 33
||||||||||||||| ||||||||
Sbjct: 9 gatagccaaggatgacttgcctgt 32
>41601_vvi-MIR169e:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgatttgcctg 32
|||||||||||||||| |||||||
Sbjct: 9 tgatagccaaggatgacttgcctg 32
>41365_ptc-MIR169k:mirbase
Length = 203
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 tttgatagccaaggatgatttgcctgta 34
|||| ||||||||||||| |||||||||
Sbjct: 6 tttggtagccaaggatgacttgcctgta 33
