miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29074_hsa-mir-1227:mirbase
Length = 88
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcgggca 60
Query: 61 tttgaccccgtgccacccttttcccca 87
|||||||||||||||||||||||||||
Sbjct: 61 tttgaccccgtgccacccttttcccca 87
>31298_ppy-mir-1227:mirbase
Length = 88
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcagtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 tttgaccccgtgccacccttttcccca 87
| ||||| | |||||||||||||||||
Sbjct: 61 tctgaccacatgccacccttttcccca 87
>28157_mml-mir-1227:mirbase
Length = 88
Score = 133 bits (67), Expect = 2e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcggtggtgggcaccgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 tttgaccccgtgccacccttttcccca 87
||||||||||||| ||| |||||||
Sbjct: 61 gctgaccccgtgccatcctcttcccca 87
