miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29098_hsa-mir-1253:mirbase
Length = 105
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 agcagcaagagatagaatccaaaagagaagaagatcagcctgcagatgtggactgctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagcaagagatagaatccaaaagagaagaagatcagcctgcagatgtggactgctaaa 60
Query: 61 tgcaggctgatcttctcccctttgggattctcttatgagaagcc 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaggctgatcttctcccctttgggattctcttatgagaagcc 104
>31313_ppy-mir-1253:mirbase
Length = 105
Score = 167 bits (84), Expect = 2e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 1 agcagcaagagatagaatccaaaagagaagaagatcagcctgcagatgtggactgctaaa 60
||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 agcagcaagaggtaaaatccaaaagaggagaagatcagcctgcagatgtggactgctaaa 60
Query: 61 tgcaggctgatcttctcccctttgggattctcttatgaga 100
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 tgcaggctgatcttctcctctttgggattctcttatgaga 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 agaatccaaaagagaagaagatcagcctgca 44
||||||| |||||| ||||||||||||||||
Sbjct: 91 agaatcccaaagaggagaagatcagcctgca 61
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 61 tgcaggctgatcttctcccctttgggatt 89
|||||||||||||||||| |||| |||||
Sbjct: 44 tgcaggctgatcttctcctcttttggatt 16
