miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41804_bdi-MIR437:mirbase
          Length = 141

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 113 gagggagtacaacatttatgtttgtcttaa 142
           ||||||||||||||||||||||||||||||
Sbjct: 141 gagggagtacaacatttatgtttgtcttaa 112




>41811_bdi-MIR1135:mirbase
          Length = 138

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 50 ctcaaatttgcccaaatatggatgtatctat 80
          |||||||||||||||||| ||||||||||||
Sbjct: 41 ctcaaatttgcccaaatacggatgtatctat 71




>41856_bdi-MIR5183:mirbase
          Length = 152

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 47  tgactcaaatttgcccaaatatggatgtatctattc 82
           ||||||||||||| ||||||||||| ||| ||||||
Sbjct: 118 tgactcaaatttgtccaaatatggacgtagctattc 83




>41840_bdi-MIR5171:mirbase
          Length = 154

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 42/47 (89%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                          
Query: 30  tccgtcccatatttaagtgactcaaatttgcccaaatatggatgtat 76
           ||||||||||| |||||||||| |||||||  |||||||| ||||||
Sbjct: 117 tccgtcccata-ttaagtgacttaaatttgttcaaatatgaatgtat 72




>41809_bdi-MIR1122:mirbase
          Length = 180

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 50 ctcaaatttgcccaaatatggatgtatctat 80
          |||||||||| ||||||| ||||||||||||
Sbjct: 93 ctcaaatttgtccaaatacggatgtatctat 63




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  tagtactccctccgtcccata 40
           |||||||||||||||||||||
Sbjct: 130 tagtactccctccgtcccata 110




>41833_bdi-MIR5164:mirbase
          Length = 166

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 20 tagtactccctccgtcccata 40
          |||||||||||||||||||||
Sbjct: 29 tagtactccctccgtcccata 49




>42145_osa-MIR812h:mirbase
          Length = 187

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 atgggacggagggagtacaa 124
           ||||||||||||||||||||
Sbjct: 20  atgggacggagggagtacaa 1




>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 tatgggacggagggagtaca 123
           ||||||||||||||||||||
Sbjct: 69  tatgggacggagggagtaca 88