miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29115_hsa-mir-1267:mirbase
Length = 78
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 ctcccaaatctcctgttgaagtgtaatccccacctccagcattggggattacatttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcccaaatctcctgttgaagtgtaatccccacctccagcattggggattacatttcaac 60
Query: 61 atgagatttggatgag 76
||||||||||||||||
Sbjct: 61 atgagatttggatgag 76
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 43 tggggattacatttcaacatgagatttgg 71
||||||||||| ||||||| |||||||||
Sbjct: 32 tggggattacacttcaacaggagatttgg 4
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 4 ccaaatctcctgttgaagtgtaatcccca 32
||||||||| ||||||| |||||||||||
Sbjct: 71 ccaaatctcatgttgaaatgtaatcccca 43
>31327_ppy-mir-1267:mirbase
Length = 79
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 ctcccaaatctcctgttgaagtgtaatccccacctccagcattg-gggattacatttcaa 59
||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||||
Sbjct: 1 ctcccaaatcttctgttgaaatgtaatcaccacctccagcaaacagggattacatttcaa 60
Query: 60 catgagatttggat 73
||||||||||||||
Sbjct: 61 catgagatttggat 74
