miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29149_hsa-mir-1291:mirbase
Length = 87
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gtagaattccagtggccctgactgaagaccagcagttgtactgtggctgttggtttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtagaattccagtggccctgactgaagaccagcagttgtactgtggctgttggtttcaag 61
Query: 61 cagaggcctaaaggactgtcttcctg 86
||||||||||||||||||||||||||
Sbjct: 62 cagaggcctaaaggactgtcttcctg 87
>31347_ppy-mir-1291:mirbase
Length = 87
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gtagaattccagtggccctgactgaagaccagcagttgtactgtggctgttggtttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtagaattccagtggccctgactgaagaccagcagttgtactgtggctgttggtttcaag 61
Query: 61 cagaggcctaaaggactgtcttcctg 86
||||||||||||||||||||||||||
Sbjct: 62 cagaggcctaaaggactgtcttcctg 87
>27295_eca-mir-1291a:mirbase
Length = 87
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 12 gtggccctgactgaagaccagcagttgtactgtggctgttggtttcaagcagaggcctaa 71
|||||||||||||||||||||||||| | || | |||||||||||| |||||||||| ||
Sbjct: 13 gtggccctgactgaagaccagcagttatgctatagctgttggtttcgagcagaggcccaa 72
Query: 72 aggactgtcttcc 84
|||||||||||||
Sbjct: 73 aggactgtcttcc 85
>33483_bta-mir-1291:mirbase
Length = 74
Score = 67.9 bits (34), Expect = 1e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 13 tggccctgactgaagaccagcagttgtactgtggctgttggtttcaagcagaggcctaaa 72
|||||||||||||||||| |||||| ||| | |||| ||||||||| |||||||| | |
Sbjct: 1 tggccctgactgaagacctgcagttacactatagctgctggtttcaaacagaggcccaga 60
Query: 73 ggactgtcttcctg 86
| ||||||||||||
Sbjct: 61 gcactgtcttcctg 74
>27296_eca-mir-1291b:mirbase
Length = 56
Score = 60.0 bits (30), Expect = 3e-10
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 14 ggccctgactgaagaccagcagttgtactgtggctgttggtttcaagcag 63
|||||||| | ||||||||||||| | |||||||||||||||||||||||
Sbjct: 2 ggccctgaatcaagaccagcagtt-tgctgtggctgttggtttcaagcag 50
