miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29151_hsa-mir-1293:mirbase
          Length = 71

 Score =  123 bits (62), Expect = 2e-29
 Identities = 69/70 (98%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  gttgttctgggtggtctggagatttgtgcagcttgtacctgcacaaatctcccggaccac 60
          |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3  gttgttctgggtggtctggagatttgtgcagcttgtacctgcacaaatct-ccggaccac 61

                    
Query: 61 ttagtcttta 70
          ||||||||||
Sbjct: 62 ttagtcttta 71




>31349_ppy-mir-1293:mirbase
          Length = 74

 Score = 58.0 bits (29), Expect = 8e-10
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 tttgtgcagcttgtacctgcacaaatctc 51
          |||||||||||||||||||||||||||||
Sbjct: 22 tttgtgcagcttgtacctgcacaaatctc 50