miRNEST 2.0, an integrative microRNA resource :: BLAST
>42084_osa-MIR444b:mirbase
Length = 138
Score = 163 bits (82), Expect = 4e-41
Identities = 126/138 (91%), Gaps = 7/138 (5%)
Strand = Plus / Plus
Query: 5 atgcaagggg-tggtgacaaacttgaggcagcaactgcatatcttgcaagaaaatt---- 59
|||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 1 atgcaaggggatggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatcttta 60
Query: 60 gggttt--cagagcataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtttttcagaccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 120
Query: 118 gctgcctccctttgccaa 135
||||||||||||||||||
Sbjct: 121 gctgcctccctttgccaa 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 56 gattttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 163 bits (82), Expect = 4e-41
Identities = 126/138 (91%), Gaps = 7/138 (5%)
Strand = Plus / Plus
Query: 5 atgcaagggg-tggtgacaaacttgaggcagcaactgcatatcttgcaagaaaatt---- 59
|||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 1 atgcaaggggatggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatcttta 60
Query: 60 gggttt--cagagcataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtttttcagaccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 120
Query: 118 gctgcctccctttgccaa 135
||||||||||||||||||
Sbjct: 121 gctgcctccctttgccaa 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 56 gattttcttgcaagatgtgcagttgctgccacaagcttg 18
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 159 bits (80), Expect = 6e-40
Identities = 101/108 (93%)
Strand = Plus / Plus
Query: 16 ggtgacaaacttgaggcagcaactgcatatcttgcaagaaaattgggtttcagagcatac 75
|||||||| || |||||||||||||||||||||||||||||||||| |||| | |||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 76 cgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>42086_osa-MIR444c:mirbase
Length = 138
Score = 149 bits (75), Expect = 6e-37
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 32 cagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttcttgca 91
||||||||||||||||||||||||||| || ||| | |||||||||||||||||||||
Sbjct: 33 cagcaactgcatatcttgcaagaaaatcggttttatggccataccgatgattttcttgca 92
Query: 92 agttgtgcagttgttgtctcaagcttgctgcctccctttgcca 134
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 agctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||||| | |||||||| |||||| ||||||| ||||||
Sbjct: 60 gattttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 149 bits (75), Expect = 6e-37
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 32 cagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttcttgca 91
||||||||||||||||||||||||||| || ||| | |||||||||||||||||||||
Sbjct: 33 cagcaactgcatatcttgcaagaaaatcggttttatggccataccgatgattttcttgca 92
Query: 92 agttgtgcagttgttgtctcaagcttgctgcctccctttgcca 134
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 agctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||||| | |||||||| |||||| ||||||| ||||||
Sbjct: 60 gattttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42089_osa-MIR444d:mirbase
Length = 143
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaaa 136
|||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| | |||||||||||
Sbjct: 120 cttgaggcagcaactgcacaacttgcaagaaa 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| ||||||||||| |||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42088_osa-MIR444d:mirbase
Length = 143
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaaa 136
|||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| | |||||||||||
Sbjct: 120 cttgaggcagcaactgcacaacttgcaagaaa 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| ||||||||||| |||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42087_osa-MIR444d:mirbase
Length = 143
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaaa 136
|||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| | |||||||||||
Sbjct: 120 cttgaggcagcaactgcacaacttgcaagaaa 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| ||||||||||| |||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42091_osa-MIR444f:mirbase
Length = 154
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 78 atgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 105 atgactttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||| |||||||| | |||||||||||
Sbjct: 141 cttgaggcaacaactgcacaacttgcaagaaa 110
>42082_osa-MIR444a:mirbase
Length = 131
Score = 79.8 bits (40), Expect = 5e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 71 cataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||| |||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaa 55
|||||||||||||||||||| ||||||||||
Sbjct: 111 cttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 79.8 bits (40), Expect = 5e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 71 cataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||| |||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaa 55
|||||||||||||||||||| ||||||||||
Sbjct: 111 cttgaggcagcaactgcataacttgcaagaa 81
>42648_tae-MIR444:mirbase
Length = 426
Score = 75.8 bits (38), Expect = 8e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaaa 136
|||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaa 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||||||||||||| |||||||||||
Sbjct: 165 cttgaggcagcaactgcatgacttgcaagaaa 134
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||| ||||||||||| | |||||||||||
Sbjct: 109 cttgagacagcaactgcacaacttgcaagaaa 78
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||||||||||||||||| ||||||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaa 57
||||||||| |||||||| | ||||||||||||
Sbjct: 101 cttgaggcaacaactgcacaacttgcaagaaaa 69
>42649_tae-MIR444b:mirbase
Length = 162
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 126
|||||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 141 cttgaggcagcaactgcacgacttgcaagaaa 110
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttg 118
||||||||||||||||||||||||| ||||||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||| |||||||| | |||||||||||
Sbjct: 102 cttgaggcaacaactgcacaacttgcaagaaa 71
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcct 124
|||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 104 cttgaggcagcaactgcacgacttgcaagaaa 73
>42090_osa-MIR444e:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgc 50
|||||||||||||||||||| |||||
Sbjct: 116 cttgaggcagcaactgcataacttgc 91
>41805_bdi-MIR444:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 91 aagttgtgcagttgttgtctcaagcttgctgc 122
||||| |||||||| || ||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcata 44
||||||||||||||||||||
Sbjct: 102 cttgaggcagcaactgcata 83
