miRNEST 2.0, an integrative microRNA resource :: BLAST
>42648_tae-MIR444:mirbase
Length = 426
Score = 182 bits (92), Expect = 6e-47
Identities = 157/179 (87%), Gaps = 6/179 (3%)
Strand = Plus / Plus
Query: 7 gcatgcggcggcaccaagcatgaggcgacaactgcattacttgctgggaagacgcaagta 66
||||| ||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 13 gcatgtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagta 72
Query: 67 tgacagcgagacatgcattacttgcgggaaaggcgcaaaacgaatagaagatcatcatac 126
|||| | |||||||||||| ||||||||||| |||||||||||| |||||
Sbjct: 73 ggacacc------tgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatac 126
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgcca 185
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgcca 185
>42089_osa-MIR444d:mirbase
Length = 143
Score = 115 bits (58), Expect = 1e-26
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 124 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgc 138
Query: 184 ca 185
||
Sbjct: 139 ca 140
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 16 ggcaccaagcatgaggcgacaactgcattacttgc 50
||||||||||||||||| |||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42088_osa-MIR444d:mirbase
Length = 143
Score = 115 bits (58), Expect = 1e-26
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 124 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgc 138
Query: 184 ca 185
||
Sbjct: 139 ca 140
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 16 ggcaccaagcatgaggcgacaactgcattacttgc 50
||||||||||||||||| |||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42087_osa-MIR444d:mirbase
Length = 143
Score = 115 bits (58), Expect = 1e-26
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 124 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgc 138
Query: 184 ca 185
||
Sbjct: 139 ca 140
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 16 ggcaccaagcatgaggcgacaactgcattacttgc 50
||||||||||||||||| |||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 111 bits (56), Expect = 2e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 100 cgcaaaacgaatagaagatcatcatacttgtggctttcttgcaagttgtgcagttgctgc 159
||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 39 cgcaaaattaatagaacatcaccatacttgtggctttcttgcaagtcgtgcagttgctgc 98
Query: 160 ctcaagcttgctgcct 175
||||||||||||||||
Sbjct: 99 ctcaagcttgctgcct 114
>42649_tae-MIR444b:mirbase
Length = 162
Score = 103 bits (52), Expect = 5e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 7 gcatgcggcggcaccaagcatgaggcgacaactgcattacttgctgggaagacgcaagta 66
||||| ||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 6 gcatgtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagta 65
Query: 67 tgaca 71
||||
Sbjct: 66 ggaca 70
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tgcattacttgcgggaaaggcgcaa 104
||||||||||||||| |||||||||
Sbjct: 38 tgcattacttgcggggaaggcgcaa 62
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 91.7 bits (46), Expect = 2e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 120 atcatacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 169
|||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 57 atcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 46.1 bits (23), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42084_osa-MIR444b:mirbase
Length = 138
Score = 87.7 bits (44), Expect = 3e-18
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgcca 185
|||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||||||||| ||||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 87.7 bits (44), Expect = 3e-18
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgcca 185
|||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||||||||| ||||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42086_osa-MIR444c:mirbase
Length = 138
Score = 83.8 bits (42), Expect = 4e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgccaga 187
||||||||||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccaga 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| | ||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 83.8 bits (42), Expect = 4e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctttgccaga 187
||||||||||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccaga 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| | ||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42091_osa-MIR444f:mirbase
Length = 154
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 133 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 ggcaccaagcatgaggcgacaactgcattacttgc 50
|||||||||||||||| |||||||||||||||||
Sbjct: 6 ggcaccaagcatgaggttacaactgcattacttgc 40
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 79.8 bits (40), Expect = 7e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 58 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 46.1 bits (23), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42082_osa-MIR444a:mirbase
Length = 131
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 135 ttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
|||||||||| || ||||||||| |||| |||||||||||
Sbjct: 52 tttcttgcaaattatgcagttgccacctctagcttgctgcc 12
>42081_osa-MIR444a:mirbase
Length = 131
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 135 ttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
|||||||||| || ||||||||| |||| |||||||||||
Sbjct: 52 tttcttgcaaattatgcagttgccacctctagcttgctgcc 12
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 133 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 177
|||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 ggcaccaagcatgaggcgacaactgcattactt 48
||||||||||||||||| |||||||||||||||
Sbjct: 4 ggcaccaagcatgaggcaacaactgcattactt 36
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 174
|||||||||||||||||||||| || |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagttgtgcagttgctgcctcaagcttg 169
||||||||||| | ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42090_osa-MIR444e:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 140 gcaagttgtgcagttgctgcctcaagcttgctgcct 175
||||||| ||||||||||||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 142 aagttgtgcagttgctgcctcaagcttgctgc 173
||||| ||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
