miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 351 bits (177), Expect = 1e-97
Identities = 183/185 (98%)
Strand = Plus / Plus
Query: 9 aagtagggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagct 68
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
Query: 69 atgaatcccataagccctaatccttatttataaaaaggatttggttatatggcttacata 128
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 atgaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacata 120
Query: 129 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 180
Query: 189 ctaca 193
|||||
Sbjct: 181 ctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 347 bits (175), Expect = 2e-96
Identities = 181/183 (98%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctat 70
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 71 gaatcccataagccctaatccttatttataaaaaggatttggttatatggcttacatatc 130
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 120
Query: 131 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
Query: 191 aca 193
|||
Sbjct: 181 aca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 283 bits (143), Expect = 3e-77
Identities = 184/197 (93%), Gaps = 3/197 (1%)
Strand = Plus / Plus
Query: 8 gaagtagggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagc 67
||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 17 gaagtagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagc 76
Query: 68 tatgaatcccataagccctaatccttat---ttataaaaaggatttggttatatggctta 124
|||| ||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 77 tatggatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttg 136
Query: 125 catatctcaggagctttaacttgccctttaattgcttttactcttctttggattgaaggg 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 137 catatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggg 196
Query: 185 agctctacatcttcttt 201
|||||||||||||||||
Sbjct: 197 agctctacatcttcttt 213
>40016_ath-MIR159a:mirbase
Length = 184
Score = 240 bits (121), Expect = 3e-64
Identities = 169/184 (91%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctat 70
|||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 71 gaatcccataagccctaatccttattta--taaaaaggatttggttatatggcttacata 128
| ||||||||||||||||||||| | | ||||||||||||||||||||| || ||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcata 120
Query: 129 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 188
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 189 ctac 192
||||
Sbjct: 181 ctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 89.7 bits (45), Expect = 8e-19
Identities = 151/182 (82%), Gaps = 7/182 (3%)
Strand = Plus / Plus
Query: 16 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 75
||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 76 ccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctcagg 135
|||||| || || | ||| | || |||||||| | ||||| || |||||||||||
Sbjct: 79 ccataaaccttat--caaattcaaaataaggattt---tttatggattccatatctcagg 133
Query: 136 agctttaacttgccc-tttaattgcttttactcttctttggattgaagggagctctacat 194
|||||| |||| ||| |||||| |||| ||||||||||||||||||||||||||| |||
Sbjct: 134 agctttcacttacccctttaatggcttc-actcttctttggattgaagggagctcttcat 192
Query: 195 ct 196
||
Sbjct: 193 ct 194
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 5e-14
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 125 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 183
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 184 gagctctacatct 196
||||||| |||||
Sbjct: 181 gagctcttcatct 193
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 16 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 75
||||||| ||||||| ||| ||| |||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 76 ccataagcc 84
|||||||||
Sbjct: 67 ccataagcc 75
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctacatctt 197
||||||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctacatctt 178
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 167 cttctttggattgaagggagctctaca 193
|||||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctctaca 197
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 167 cttctttggattgaagggagctctac 192
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 167 cttctttggattgaagggagctctac 192
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>40338_rco-MIR159:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatct 196
||||||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>41918_osa-MIR159b:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 156 tctttggattgaagggagctctgcatctt 184
>41917_osa-MIR159a:mirbase
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>41868_far-MIR159:mirbase
Length = 200
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 167 tctttggattgaagggagctctgcatctt 195
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatct 196
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>40397_ahy-MIR159:mirbase
Length = 197
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacat 194
||||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctacat 180
>42691_zma-MIR159b:mirbase
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>42690_zma-MIR159a:mirbase
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 221 tctttggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>42453_sof-MIR159b:mirbase
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 11 tttggattgaagggagctctgcatctt 37
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctaca 193
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctaca 193
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctac 192
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>41919_osa-MIR159c:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctacatct 196
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 119 ggcttacatatctcaggagcttta 142
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 119 ggcttacatatctcaggagcttta 142
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 119 ggcttacatatctcaggagcttta 142
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
