miRNEST 2.0, an integrative microRNA resource :: BLAST
>40090_ath-MIR398b:mirbase
Length = 116
Score = 115 bits (58), Expect = 8e-27
Identities = 101/114 (88%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccaca 64
||||||||||||||| |||||||||||||| | | ||||||||||||||||||||| ||
Sbjct: 2 ggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctacg 61
Query: 65 tcattataacacatctgtcttttcatgtgttctcaggtcacccctgctgagctc 118
||||| | ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 tcattgttacagctct-cgttttcatgtgttctcaggtcacccctgctgagctc 114
>40091_ath-MIR398c:mirbase
Length = 115
Score = 109 bits (55), Expect = 5e-25
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccaca 64
||||||||||||||| |||||||||||||| | ||||||||||||| ||| ||||| ||
Sbjct: 2 ggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctacg 61
Query: 65 tcattataacacatctgtcttttcatgtgttctcaggtcacccctgctgagctc 118
||||| | ||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 62 tcattgt--tacagctctcgtttcatgtgttctcaggtcacccctgctgagctc 113
>39883_aly-MIR398c:mirbase
Length = 132
Score = 107 bits (54), Expect = 2e-24
Identities = 113/128 (88%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgt-aatgacgccac 63
|||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||| ||
Sbjct: 7 ggatctcgacagggtcgacatgagaacatatgagcaatcaacggctgtaaatgacgctac 66
Query: 64 atcattataacacatctgtc-ttttcatgtgtt--ctcaggtcacccctgctgagctcct 120
||||||| |||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct: 67 gtcattat--tacatctctcggtttcatgtgttaactcaggtcacccctgctgagctctt 124
Query: 121 tctctacc 128
||||||||
Sbjct: 125 tctctacc 132
>39882_aly-MIR398b:mirbase
Length = 142
Score = 97.6 bits (49), Expect = 2e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccaca 64
||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 20 ggatctcgacagggttgatatgaggacacatgtgtaatcaacggctgtaatgacgccacg 79
Query: 65 tcatt 69
|||||
Sbjct: 80 tcatt 84
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctgctga 114
||||||||||||||||| ||||||||||
Sbjct: 59 tcatgtgttctcaggtcgcccctgctga 86
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctgctg 113
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctgctg 113
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>40382_rco-MIR398b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 85 tttcatgtgttctcaggtcacccctgc 111
||||||||||||||||||| |||||||
Sbjct: 96 tttcatgtgttctcaggtcgcccctgc 122
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 86 ttcatgtgttctcaggtcacccctgc 111
|||||||||||||||||| |||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctgc 77
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccctgctga 114
|||||||||||||| ||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgctga 86
>42039_osa-MIR398a:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 101 tgtgttctcaggtcacccct 120
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 88 catgtgttctcaggtcacccctgc 111
|||||||||||||||| |||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>41245_csi-MIR398:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 132 tgtgttctcaggtcacccct 151
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 88 catgtgttctcaggtcacccctgc 111
|||||||||||||||| |||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 125 tgtgttctcaggtcacccct 144
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 84 ttttcatgtgttctcaggtcacccctgc 111
|||| ||||||||||||||| |||||||
Sbjct: 79 ttttgatgtgttctcaggtcgcccctgc 106
>41078_gra-MIR398:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41059_ghr-MIR398:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>40479_gma-MIR398b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>40478_gma-MIR398a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>40403_ahy-MIR398:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 129 tgtgttctcaggtcacccct 148
>40381_rco-MIR398a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40308_bol-MIR398a:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>40089_ath-MIR398a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>39881_aly-MIR398a:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 122 tgtgttctcaggtcacccct 141
