miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32014_mmu-mir-344-1:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 5e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 17 cagtcaggctgctggctagagtacagctatcagctggtacctgatctagtcaaagcctga 76
|||||||||| ||||||||| | ||| || ||||||||||||||||||| ||||||||||
Sbjct: 20 cagtcaggctcctggctagattccaggtaccagctggtacctgatctagccaaagcctga 79
Query: 77 cagtaa 82
| ||||
Sbjct: 80 ctgtaa 85
>32015_mmu-mir-344-2:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 17 cagtcaggctgctggctagagtacagctatcagctggtacctgatctagtcaaagcctga 76
|||||||||| ||||||||| | ||| || || |||||||||||||||| ||||||||||
Sbjct: 8 cagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaaagcctga 67
Query: 77 cagtaaactgc 87
| |||| ||||
Sbjct: 68 ctgtaagctgc 78
>32865_rno-mir-344a-1:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 17 cagtcaggctgctggctagagtacagctatcagctggtacctgatctagtcaaagcctga 76
|||||||||| ||||||||| | ||| || || |||||||||||||||| ||||||||||
Sbjct: 20 cagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaaagcctga 79
Query: 77 cagtaaactgc 87
| |||| ||||
Sbjct: 80 ccgtaagctgc 90
>32866_rno-mir-344a-1:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 17 cagtcaggctgctggctagagtacagctatcagctggtacctgatctagtcaaagcctga 76
|||||||||| ||||||||| | ||| || || |||||||||||||||| ||||||||||
Sbjct: 20 cagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaaagcctga 79
Query: 77 cagtaaactgc 87
| |||| ||||
Sbjct: 80 ccgtaagctgc 90
>32867_rno-mir-344a-2:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 17 cagtcaggctgctggctagagtacagctatcagctggtacctgatctagtcaaagcctga 76
|||||||||| ||||||||| | ||| || || |||||||||||||||| ||||||||||
Sbjct: 18 cagtcaggctcctggctagattccaggtaccaactggtacctgatctagccaaagcctga 77
Query: 77 cagtaa 82
| ||||
Sbjct: 78 ctgtaa 83
