miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32034_mmu-mir-363:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 tgttatcaggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttatcaggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggt 60
Query: 61 atccatctgtaaacc 75
|||||||||||||||
Sbjct: 61 atccatctgtaaacc 75
>27145_eca-mir-363:mirbase
Length = 75
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||||
Sbjct: 9 ggtggatcacgatgcaattttgattagtataataggagaaaaattgcacggtatccatct 68
Query: 69 gtaaacc 75
|||||||
Sbjct: 69 gtaaacc 75
>26525_tgu-mir-363:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || || |||||| |||||||||||||||||||||
Sbjct: 16 ggtggatcacgatgcaattttgattagtttagtaggagaaaaattgcacggtatccatct 75
Query: 69 gtaaacc 75
|||||||
Sbjct: 76 gtaaacc 82
>27863_mml-mir-363:mirbase
Length = 75
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || | ||||||| |||||||||||||||||||||
Sbjct: 9 ggtggatcacgatgcaattttgattagtatcataggagaaaaattgcacggtatccatct 68
Query: 69 gtaaacc 75
|||||||
Sbjct: 69 gtaaacc 75
>30967_ppy-mir-363:mirbase
Length = 75
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || | ||||||| |||||||||||||||||||||
Sbjct: 9 ggtggatcacgatgcaattttgattagtatcataggagaaaaattgcacggtatccatct 68
Query: 69 gtaaacc 75
|||||||
Sbjct: 69 gtaaacc 75
>31548_oan-mir-363:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || || |||||| |||||||||||||||||||||
Sbjct: 16 ggtggatcacgatgcaattttgattagtttagtaggagaaaaattgcacggtatccatct 75
Query: 69 gtaaacc 75
|||||||
Sbjct: 76 gtaaacc 82
>32882_rno-mir-363:mirbase
Length = 87
Score = 85.7 bits (43), Expect = 4e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 tgttatcaggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggt 60
||||||| |||||| ||||||||||||||| || | ||||| |||| ||||||||||||
Sbjct: 7 tgttatcgggtggatcacgatgcaattttgattagagtaatgggagagaaattgcacggt 66
Query: 61 atccatctgtaaacc 75
|||||||||||||||
Sbjct: 67 atccatctgtaaacc 81
>34071_ssc-mir-363:mirbase
Length = 80
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || | ||||||| |||||||||||||||||||||
Sbjct: 11 ggtggatcacgatgcaattttgattagtatcataggagaaaaattgcacggtatccatct 70
Query: 69 gtaaacc 75
|||||||
Sbjct: 71 gtaaacc 77
>33337_bta-mir-363:mirbase
Length = 74
Score = 81.8 bits (41), Expect = 6e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||||
Sbjct: 9 ggtggatcacgatgcaattttgattagtataataggagaaaaattgcacggtatccatct 68
Query: 69 g 69
|
Sbjct: 69 g 69
>26813_cfa-mir-363:mirbase
Length = 67
Score = 79.8 bits (40), Expect = 2e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||
Sbjct: 4 ggtggatcacgatgcaattttgatgagtataataggagaaaaattgcacggtatccatct 63
Query: 69 gtaa 72
||||
Sbjct: 64 gtaa 67
>28600_hsa-mir-363:mirbase
Length = 75
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| ||||||||||||||| | || | ||||||| |||||||||||||||||||||
Sbjct: 9 ggtggatcacgatgcaattttgatgagtatcataggagaaaaattgcacggtatccatct 68
Query: 69 gtaaacc 75
|||||||
Sbjct: 69 gtaaacc 75
>25849_xtr-mir-363:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| |||||||||||||| || || | |||||| |||||||||||||||||||||
Sbjct: 15 ggtggatcacgatgcaattttatttagtttggtaggagaaaaattgcacggtatccatct 74
Query: 69 gtaaacc 75
|||||||
Sbjct: 75 gtaaacc 81
>25850_xtr-mir-363:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 68
|||||| |||||||||||||| || || | |||||| |||||||||||||||||||||
Sbjct: 15 ggtggatcacgatgcaattttatttagtttggtaggagaaaaattgcacggtatccatct 74
Query: 69 gtaaacc 75
|||||||
Sbjct: 75 gtaaacc 81
>25670_xla-mir-363:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 41 taggaggaaaattgcacggtatccatctgtaaacc 75
|||||| ||||||||||||||||||||||||||||
Sbjct: 48 taggagaaaaattgcacggtatccatctgtaaacc 82
>27444_mdo-mir-363:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 9e-10
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 9 ggtggaacacgatgcaa-ttttggttggtgtaataggaggaaaa-ttgcacggtatccat 66
|||||| |||||||||| ||||| | || ||||||||| |||| |||||||||||||||
Sbjct: 14 ggtggatcacgatgcaaattttgataagtttaataggagaaaaaattgcacggtatccat 73
Query: 67 ctgtaaacc 75
|||||||||
Sbjct: 74 ctgtaaacc 82
>34393_dre-mir-363:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 aaaattgcacggtatccatctgtaa 72
|||||||||||||||||||||||||
Sbjct: 76 aaaattgcacggtatccatctgtaa 100
