miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agagtgctcgaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 170 bits (86), Expect = 1e-43
Identities = 104/110 (94%)
Strand = Plus / Plus
Query: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
|||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
Query: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>32883_rno-mir-365:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 14 acagcaagaaaaatgagggactttcaggggcagctgtgtttcctgactcagtcataatgc 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagcaagaaaaatgagggactttcaggggcagctgtgtttcctgactcagtcataatgc 60
Query: 74 ccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 22 aaaaatgagggactttcaggggcagctgtgtttcctgactcagtcataatgcccctaaaa 81
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaa 60
Query: 82 atccttattgttcttgcagt 101
||||||||||||||||||||
Sbjct: 61 atccttattgttcttgcagt 80
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 22 aaaaatgagggactttcaggggcagctgtgtttcctgactcagtcataatgcccctaaaa 81
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaa 60
Query: 82 atccttattgttcttgcagt 101
||||||||||||||||||||
Sbjct: 61 atccttattgttcttgcagt 80
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtg-tttcctgactcagtcataatgc 73
||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
Query: 74 ccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||
Sbjct: 63 ccctaaaaatccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 131 bits (66), Expect = 1e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtg-tttcctgactcagtcataatgc 73
||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 27 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 86
Query: 74 ccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||
Sbjct: 87 ccctaaaaatccttattgttcttgca 112
>27146_eca-mir-365:mirbase
Length = 66
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 25 aatgagggactttcaggggcagctgtgtttcctgactcagtcataatgcccctaaaaatc 84
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaaatc 60
Query: 85 cttatt 90
||||||
Sbjct: 61 cttatt 66
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtt-tcctgactcagtcataatgc 73
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 74 ccctaaaaatccttattgttcttgcagtg 102
|||||||||||||||||| ||||||||||
Sbjct: 65 ccctaaaaatccttattgctcttgcagtg 93
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtt-tcctgactcagtcataatgc 73
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 74 ccctaaaaatccttattgttcttgcagtg 102
|||||||||||||||||| ||||||||||
Sbjct: 65 ccctaaaaatccttattgctcttgcagtg 93
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 107 bits (54), Expect = 2e-24
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttcctga-ctcagtcataatgc 73
||||||||||||||||||||||| |||||||||||||||| | | | ||||||||||||
Sbjct: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
Query: 74 ccctaaaaatccttattgttcttgca 99
|||||||||||||||||| |||||||
Sbjct: 64 ccctaaaaatccttattgctcttgca 89
>34650_fru-mir-365:mirbase
Length = 95
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttcctga-ctcagtcataatgc 73
||||||||||| ||||||||||| |||||||||||||||| | | | ||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 74 ccctaaaaatccttattgttcttgca 99
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttcctga-ctcagtcataatgc 73
||||||||||| ||||||||||| |||||||||||||||| | | | ||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 74 ccctaaaaatccttattgttcttgca 99
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>27445_mdo-mir-365:mirbase
Length = 87
Score = 77.8 bits (39), Expect = 2e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
Query: 82 atccttattgttcttgcag 100
|||||||||| ||||||||
Sbjct: 69 atccttattgctcttgcag 87
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 75.8 bits (38), Expect = 6e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttc-ctgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| |||||||| || || | ||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgcccctaaaa 68
Query: 82 atccttattgttcttgca 99
||||||||||||||||||
Sbjct: 69 atccttattgttcttgca 86
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 75.8 bits (38), Expect = 6e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 68 atccttattgctcttgca 85
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 68
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 69 atccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccgctatcataatgcccctaaaa 69
Query: 82 atccttattgttcttgca 99
|||||||||| |||||||
Sbjct: 70 atccttattgctcttgca 87
>31549_oan-mir-365:mirbase
Length = 83
Score = 65.9 bits (33), Expect = 6e-12
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 7 aaaatgagggacttttgggggcagatgtgtttccattgcactatcataatgcccctaaaa 66
Query: 82 atccttattgttcttgc 98
|||||||||| ||||||
Sbjct: 67 atccttattgctcttgc 83
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 63.9 bits (32), Expect = 2e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 29 agggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaaatcctt 87
||||||||| ||||||| ||||||||| | || | |||||||||||||||||||||||
Sbjct: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
Query: 88 attgttcttgca 99
|||| |||||||
Sbjct: 61 attgctcttgca 72
>33338_bta-mir-365:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 65 tcataatgcccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 65 tcataatgcccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 65 tcataatgcccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||| |||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 4e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
||||||||||||||| ||||||| ||||||||| | | | |||||||||||||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 67
Query: 82 atccttattg 91
||||||||||
Sbjct: 68 atccttattg 77
