miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32886_rno-mir-370:mirbase
Length = 79
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 agacggagagaccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacagagagaccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtttgtctgtct 79
|||||||||||||||||||
Sbjct: 61 gaacctggtttgtctgtct 79
>26818_cfa-mir-370:mirbase
Length = 79
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 1 agacggagagaccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtttgtctgtct 79
||||||||| |||||||||
Sbjct: 61 gaacctggtctgtctgtct 79
>27151_eca-mir-370:mirbase
Length = 75
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 agacggagagaccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtttgtct 75
||||||||| |||||
Sbjct: 61 gaacctggtctgtct 75
>27869_mml-mir-370:mirbase
Length = 75
Score = 119 bits (60), Expect = 3e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggtct 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
>28606_hsa-mir-370:mirbase
Length = 75
Score = 111 bits (56), Expect = 7e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaacctggtct 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
>30346_ptr-mir-370:mirbase
Length = 74
Score = 111 bits (56), Expect = 7e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 11 ccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaacctggtct 70
Query: 72 gtct 75
||||
Sbjct: 71 gtct 74
>30973_ppy-mir-370:mirbase
Length = 75
Score = 111 bits (56), Expect = 7e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaacctggtct 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
>33344_bta-mir-370:mirbase
Length = 75
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaacctggtct 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
>33815_oar-mir-370:mirbase
Length = 107
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 25 ccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaacctggtat 84
Query: 72 gtctgtct 79
||||||||
Sbjct: 85 gtctgtct 92
>33816_oar-mir-370:mirbase
Length = 107
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 25 ccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaacctggtat 84
Query: 72 gtctgtct 79
||||||||
Sbjct: 85 gtctgtct 92
