miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32899_rno-mir-383:mirbase
Length = 74
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 62
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 63 tcagaaagag 72
>27165_eca-mir-383:mirbase
Length = 73
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>27889_mml-mir-383:mirbase
Length = 73
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>28636_hsa-mir-383:mirbase
Length = 73
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>30990_ppy-mir-383:mirbase
Length = 73
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>30363_ptr-mir-383:mirbase
Length = 72
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctgg 63
Query: 61 tcagaaaga 69
|||||||||
Sbjct: 64 tcagaaaga 72
>33360_bta-mir-383:mirbase
Length = 73
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtggatatcaatcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>34086_ssc-mir-383:mirbase
Length = 82
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8 ctcagatcagaaggtgattgtggctttgggtagatattaatcagccacagcactgcctgg 67
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 68 tcagaaagag 77
>26834_cfa-mir-383:mirbase
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 4 agatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctggtca 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctggtca 60
Query: 64 ga 65
||
Sbjct: 61 ga 62
>25854_xtr-mir-383:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggcttttagtagatattaagcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>26025_gga-mir-383:mirbase
Length = 73
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||
Sbjct: 4 ctcagatcagaaggtgattgtggctttgggtaaatattgagcagccacagcactgcctgg 63
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 64 tcagaaagag 73
>31550_oan-mir-383:mirbase
Length = 119
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||||||| | || ||| |||||||| ||||||||||
Sbjct: 29 ctcagatcagaaggtgattgtggctttgggtagctactaagcagccacaacactgcctgg 88
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 89 tcagaaagag 98
>26529_tgu-mir-383:mirbase
Length = 72
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||
Sbjct: 8 ctcagatcagaaggtgattgtggctttgagtaaatattaagcagccacagcactgcctgg 67
Query: 61 tcaga 65
|||||
Sbjct: 68 tcaga 72
>27448_mdo-mir-383:mirbase
Length = 70
Score = 67.9 bits (34), Expect = 8e-13
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
||||||||||||||||| ||||||||| ||| || || | |||||||| ||||| ||||
Sbjct: 1 ctcagatcagaaggtgattgtggctttcggtagacatggaacagccacatcactggctgg 60
Query: 61 tcagaaagag 70
||||||||||
Sbjct: 61 tcagaaagag 70
