miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32058_mmu-mir-384:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
||||||||||||||||||||||||||||
Sbjct: 61 ctagaaattgttcacaatgcctgtaaca 88
>32900_rno-mir-384:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 6 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
Query: 66 aattgttcacaatgcctgtaaca 88
|||||||||||||||||||||||
Sbjct: 61 aattgttcacaatgcctgtaaca 83
>32901_rno-mir-384:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 6 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
Query: 66 aattgttcacaatgcctgtaaca 88
|||||||||||||||||||||||
Sbjct: 61 aattgttcacaatgcctgtaaca 83
>27166_eca-mir-384:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 tgttaaatcaggagttgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattc 60
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
||||||||||||||||||||||||||||
Sbjct: 61 ctagaaattgttcacaatgcctgtaaca 88
>27890_mml-mir-384:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
|||||||| ||||||||||||||||||||||||||| ||||||||||| |||| |||||
Sbjct: 1 tgttaaattaggaattgtaaacaattcctaggcaatatgtataatgttcataagacattc 60
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
|||||||||||||| |||||||||||||
Sbjct: 61 ctagaaattgttcataatgcctgtaaca 88
>28637_hsa-mir-384:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
|||||||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 1 tgttaaatcaggaattttaaacaattcctagacaatatgtataatgttcataagtcattc 60
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
|||||||||||||| |||||||||||||
Sbjct: 61 ctagaaattgttcataatgcctgtaaca 88
>30991_ppy-mir-384:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 tgttaaatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattc 60
||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 1 tgttaaatcaggaattgtaaacaattcctagacaatatgtataatgttcataagtcattc 60
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
||||||||| |||| |||||||||||||
Sbjct: 61 ctagaaatttttcataatgcctgtaaca 88
>26835_cfa-mir-384:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 16 tgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctagaaattgttcac 75
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattcctagaaattgttcac 60
Query: 76 aat 78
|||
Sbjct: 61 aat 63
