miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32066_mmu-mir-423:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 acttgtgaggaaataaaggaagttaggctgaggggcagagagcgagacttttctattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgtgaggaaataaaggaagttaggctgaggggcagagagcgagacttttctattttc 60
Query: 61 caaaagctcggtctgaggcccctcagtcttgcttcctaccccgcgcttg 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaagctcggtctgaggcccctcagtcttgcttcctaccccgcgcttg 109
>27898_mml-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>27899_mml-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>33367_bta-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>33368_bta-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>30370_ptr-mir-423:mirbase
Length = 93
Score = 184 bits (93), Expect = 9e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcg 105
|||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcg 93
>28645_hsa-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
|||||||||||||||||||||||||| |||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaacccgcgc 94
>28646_hsa-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
|||||||||||||||||||||||||| |||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaacccgcgc 94
>30999_ppy-mir-423:mirbase
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 17 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 60
Query: 77 ggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||
Sbjct: 61 ggcccctcagtcttgcttcctaccccgcgc 90
>31000_ppy-mir-423:mirbase
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 17 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 60
Query: 77 ggcccctcagtcttgcttcctaccccgcgc 106
||||||||||||||||||||||||||||||
Sbjct: 61 ggcccctcagtcttgcttcctaccccgcgc 90
>34089_ssc-mir-423:mirbase
Length = 80
Score = 159 bits (80), Expect = 5e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 20 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 80 ccctcagtcttgcttcctac 99
||||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcctac 80
>34090_ssc-mir-423:mirbase
Length = 80
Score = 159 bits (80), Expect = 5e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 20 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 80 ccctcagtcttgcttcctac 99
||||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcctac 80
>32908_rno-mir-423:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 19 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
Query: 79 cccctcagtcttgcttcct 97
|||||||||||||||||||
Sbjct: 61 cccctcagtcttgcttcct 79
>29349_hsa-mir-3184:mirbase
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 20 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 16
Query: 80 ccctcagtcttgctt 94
|||||||||||||||
Sbjct: 15 ccctcagtcttgctt 1
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 7e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 25 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 85 agt 87
|||
Sbjct: 61 agt 63
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 7e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 25 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 85 agt 87
|||
Sbjct: 61 agt 63
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 29 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 87
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 59
