miRNEST 2.0, an integrative microRNA resource :: BLAST
>32910_rno-mir-429:mirbase
Length = 85
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 cctgctgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 cctgctgatggatgtcttaccagacatggttagatctggatgtatctgtctaatactgtc 62
Query: 61 tggtaatgccgtccatcca 79
|||||||||||||||||||
Sbjct: 63 tggtaatgccgtccatcca 81
>25673_xla-mir-429:mirbase
Length = 68
Score = 135 bits (68), Expect = 5e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 9 tggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatg 60
Query: 69 ccgtccat 76
||||||||
Sbjct: 61 ccgtccat 68
>33372_bta-mir-429:mirbase
Length = 84
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 cctgctgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtc 60
||||| ||||| ||||||||||||| |||||||||||| | | ||||||||||||||||
Sbjct: 3 cctgccgatgggcgtcttaccagacacggttagatctgg-tccttctgtctaatactgtc 61
Query: 61 tggtaatgccgtccatccacggc 83
|||||||||||||||||| ||||
Sbjct: 62 tggtaatgccgtccatccccggc 84
>26843_cfa-mir-429:mirbase
Length = 85
Score = 85.7 bits (43), Expect = 4e-18
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 1 cctgctgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtc 60
||||||||||| ||||||||||||| |||||||||||| | | ||||||||||||||
Sbjct: 3 cctgctgatgggcgtcttaccagacacggttagatctgggttctggtgtctaatactgtc 62
Query: 61 tggtaatgccgtccatcca 79
|||||||||||| ||||||
Sbjct: 63 tggtaatgccgttcatcca 81
>27176_eca-mir-429:mirbase
Length = 67
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
Query: 74 cat 76
|||
Sbjct: 65 cat 67
>34094_ssc-mir-429:mirbase
Length = 81
Score = 83.8 bits (42), Expect = 2e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 7 gatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaa 66
||||| ||||||||||| || |||||||||||| | | ||||||||||||||||||||||
Sbjct: 7 gatgggtgtcttaccaggcacggttagatctggtt-cttctgtctaatactgtctggtaa 65
Query: 67 tgccgtccat 76
||||||||||
Sbjct: 66 tgccgtccat 75
>34400_dre-mir-429:mirbase
Length = 82
Score = 71.9 bits (36), Expect = 7e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 6 tgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtctggta 65
||||||| |||||||||||||||||||||| | | | |||||||||||||||||||
Sbjct: 6 tgatggacgtcttaccagacatggttagatgtaataacttgtgtctaatactgtctggta 65
Query: 66 atgccgtccatc 77
||||||||||||
Sbjct: 66 atgccgtccatc 77
>28649_hsa-mir-429:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||
Sbjct: 16 gtcttaccagacatggttagacctggc--cctctgtctaatactgtctggtaaaaccgtc 73
Query: 74 catcc 78
|||||
Sbjct: 74 catcc 78
>31003_ppy-mir-429:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||
Sbjct: 16 gtcttaccagacatggttagacctggccg--tctgtctaatactgtctggtaaaaccgtc 73
Query: 74 catcc 78
|||||
Sbjct: 74 catcc 78
>26026_gga-mir-429:mirbase
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 cctgctgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtc 60
||||||||| | ||||||||||| || ||||||||| | | ||||||||||||||||
Sbjct: 2 cctgctgattgctgtcttaccaggcaaagttagatctagctatttctgtctaatactgtc 61
Query: 61 tggtaatgccgtc 73
|||||||||||||
Sbjct: 62 tggtaatgccgtc 74
>27902_mml-mir-429:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 6e-11
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
||||||||||||| ||||||| |||| | |||||||||||||||||||||| |||||
Sbjct: 16 gtcttaccagacacggttagacctggctc--tctgtctaatactgtctggtaaaaccgtc 73
Query: 74 catccacggc 83
||||| ||||
Sbjct: 74 catccgcggc 83
>25860_xtr-mir-429:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 12 atgtcttaccagacatggttagatctggatgcatct-gtctaatactgtctggtaatgcc 70
||||||||||||||| |||||||||| | | | ||| |||||||||||||||||||||||
Sbjct: 14 atgtcttaccagacaaggttagatctagttac-tctcgtctaatactgtctggtaatgcc 72
Query: 71 gt 72
||
Sbjct: 73 gt 74
>27450_mdo-mir-429:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 3e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 13 tgtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgcc 70
|||||||||||||| ||||||||| | | ||||||||||||||||||||||||||
Sbjct: 7 tgtcttaccagacaaagttagatctcgctatttctgtctaatactgtctggtaatgcc 64
>34652_fru-mir-429:mirbase
Length = 76
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 47 tgtctaatactgtctggtaatgccgtccat 76
||||||||||||||||||||||||||||||
Sbjct: 47 tgtctaatactgtctggtaatgccgtccat 76
>34800_tni-mir-429:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 47 tgtctaatactgtctggtaatgccgtccat 76
||||||||||||||||||||||||||||||
Sbjct: 49 tgtctaatactgtctggtaatgccgtccat 78
>31552_oan-mir-429:mirbase
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 cctgctgatggatgtcttaccagacatggttagatctggatgcatctgtctaatactgtc 60
||||||||| | |||||||||||||| |||||||||| | | |||||||||||||
Sbjct: 14 cctgctgattggtgtcttaccagacaaagttagatctgactattttcgtctaatactgtc 73
Query: 61 tggtaatgccgtc 73
|||||||||||||
Sbjct: 74 tggtaatgccgtc 86
>34401_dre-mir-429b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 47 tgtctaatactgtctggtaatgcc 70
|||||||||||| |||||||||||
Sbjct: 63 tgtctaatactgcctggtaatgcc 86
>34889_sko-mir-200:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tctaatactgtctggtaatg 68
||||||||||||||||||||
Sbjct: 59 tctaatactgtctggtaatg 78
>24693_bfl-mir-200b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 ctaatactgtctggtaatg 68
|||||||||||||||||||
Sbjct: 58 ctaatactgtctggtaatg 76
