miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32911_rno-mir-431:mirbase
          Length = 114

 Score =  180 bits (91), Expect = 1e-46
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 67

                                         
Query: 61 cgtcttgcagggcttctcgcaagacgacatc 91
          |||||||||||||||||||||||||||||||
Sbjct: 68 cgtcttgcagggcttctcgcaagacgacatc 98




>27903_mml-mir-431:mirbase
          Length = 114

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68

                                        
Query: 62 gtcttgcagggcttctcgcaagacgacatc 91
          ||||||||||||||||||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatc 98




>28650_hsa-mir-431:mirbase
          Length = 114

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68

                                        
Query: 62 gtcttgcagggcttctcgcaagacgacatc 91
          ||||||||||||||||||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatc 98




>30373_ptr-mir-431:mirbase
          Length = 113

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 67

                                        
Query: 62 gtcttgcagggcttctcgcaagacgacatc 91
          ||||||||||||||||||||||||||||||
Sbjct: 68 gtcttgcagggcttctcgcaagacgacatc 97




>31004_ppy-mir-431:mirbase
          Length = 114

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9  gtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggtc 68

                                        
Query: 62 gtcttgcagggcttctcgcaagacgacatc 91
          ||||||||||||||||||||||||||||||
Sbjct: 69 gtcttgcagggcttctcgcaagacgacatc 98




>27177_eca-mir-431:mirbase
          Length = 89

 Score =  176 bits (89), Expect = 2e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60

                                       
Query: 61 cgtcttgcagggcttctcgcaagacgaca 89
          |||||||||||||||||||||||||||||
Sbjct: 61 cgtcttgcagggcttctcgcaagacgaca 89




>33373_bta-mir-431:mirbase
          Length = 114

 Score =  170 bits (86), Expect = 1e-43
 Identities = 89/90 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
          ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 8  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 67

                                        
Query: 61 cgtcttgcagggcttctcgcaagacgacat 90
          ||||||||||||||||||||||||||||||
Sbjct: 68 cgtcttgcagggcttctcgcaagacgacat 97




>33846_oar-mir-431:mirbase
          Length = 91

 Score =  161 bits (81), Expect = 1e-40
 Identities = 87/89 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggtaacgttgcaggt 60
          ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  cgtcctgcgaggtgtcttgcaggccgtcatgcaggccacactgacggaaacgttgcaggt 60

                                       
Query: 61 cgtcttgcagggcttctcgcaagacgaca 89
          ||||||||||||| |||||||||||||||
Sbjct: 61 cgtcttgcagggcgtctcgcaagacgaca 89