miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32074_mmu-mir-434:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tcgactctgggtttgaaccaaagctcgactcatggtttgaaccattacttaattcgtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgactctgggtttgaaccaaagctcgactcatggtttgaaccattacttaattcgtggt 60
Query: 61 ttgaaccatcactcgactcctggttcgaaccatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaccatcactcgactcctggttcgaaccatc 94
>33029_rno-mir-3543:mirbase
Length = 115
Score = 109 bits (55), Expect = 4e-25
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 3 gactctgggtttgaaccaaagctcgactcatggtttgaaccattacttaattcgtggttt 62
|||||| ||||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct: 90 gactcttggtttgaaccacagctcgactcatggtttgaaccattgtcaaactcgtggttt 31
Query: 63 gaaccatcactcgactcctggtt 85
|||||||||||||||||||||||
Sbjct: 30 gaaccatcactcgactcctggtt 8
>32913_rno-mir-434:mirbase
Length = 81
Score = 101 bits (51), Expect = 9e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 11 gtttgaaccaaagctcgactcatggtttgaaccattacttaattcgtggtttgaaccatc 70
|||||||||| ||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1 gtttgaaccacagctcgactcatggtttgaaccattgtcaaactcgtggtttgaaccatc 60
Query: 71 actcgactcctggtt 85
|||||||||||||||
Sbjct: 61 actcgactcctggtt 75
