miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32083_mmu-mir-450b:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 gatacagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatacagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacat 60
Query: 61 tttgcatgcataattttgtatc 82
||||||||||||||||||||||
Sbjct: 61 tttgcatgcataattttgtatc 82
>27183_eca-mir-450b:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 3 tacagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattt 62
|||| ||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 1 tacaaaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattt 60
Query: 63 tgcatgcataattttgtat 81
||||| |||| ||||||||
Sbjct: 61 tgcatccatagttttgtat 79
>27184_eca-mir-450b:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 3 tacagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattt 62
|||| ||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 1 tacaaaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattt 60
Query: 63 tgcatgcataattttgtat 81
||||| |||| ||||||||
Sbjct: 61 tgcatccatagttttgtat 79
>27911_mml-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>27912_mml-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>28659_hsa-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>28660_hsa-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>31012_ppy-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>31013_ppy-mir-450b:mirbase
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
Query: 65 catgcataattttgtat 81
||| |||| ||||||||
Sbjct: 62 catccatagttttgtat 78
>30381_ptr-mir-450b:mirbase
Length = 77
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
Query: 65 catgcataattttgta 80
||| |||| |||||||
Sbjct: 62 catccatagttttgta 77
>34098_ssc-mir-450b:mirbase
Length = 80
Score = 85.7 bits (43), Expect = 4e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 8 aattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcat 67
||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 3 aattatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcat 62
Query: 68 gcataattttgtatc 82
|||| |||||||||
Sbjct: 63 ccatagttttgtatc 77
>34099_ssc-mir-450b:mirbase
Length = 80
Score = 85.7 bits (43), Expect = 4e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 8 aattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcat 67
||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 3 aattatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcat 62
Query: 68 gcataattttgtatc 82
|||| |||||||||
Sbjct: 63 ccatagttttgtatc 77
>26849_cfa-mir-450b:mirbase
Length = 58
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 14 ttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcat 67
||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 1 ttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcat 54
>27186_eca-mir-451a:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 tatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcatgca 70
||||||||| | ||||||| ||||| ||| |||| |||||||||||||||||||| ||
Sbjct: 15 tatttttgcgatgtgttcct-aatacgtaatataaatgtattgggaacattttgcattca 73
Query: 71 taattttgtatc 82
|| |||||||||
Sbjct: 74 tagttttgtatc 85
>33381_bta-mir-450:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 48 gtattgggaacattttgcatgcataattttgtatc 82
|||||||||||||||||||| |||| |||||||||
Sbjct: 55 gtattgggaacattttgcattcatagttttgtatc 89
>28657_hsa-mir-450a-1:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||||||||||||||| ||| |||||||||
Sbjct: 52 tattgggaacattttgcatgtatagttttgtatc 85
>30379_ptr-mir-450a-1:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||||||||||||||| ||| |||||||||
Sbjct: 52 tattgggaacattttgcatgtatagttttgtatc 85
>31011_ppy-mir-450a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 tatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcatgca 70
||||||||| | ||||||| ||||| ||| |||| |||||||| ||||||||||| ||
Sbjct: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
Query: 71 taattttgtatc 82
|| |||||||||
Sbjct: 79 tagttttgtatc 90
>27910_mml-mir-450a-2:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 48 gtattgggaacattttgcatgcataattttgtatc 82
|||||||| ||||||||||| |||| |||||||||
Sbjct: 56 gtattggggacattttgcattcatagttttgtatc 90
>28658_hsa-mir-450a-2:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 48 gtattgggaacattttgcatgcataattttgtatc 82
|||||||| ||||||||||| |||| |||||||||
Sbjct: 56 gtattggggacattttgcattcatagttttgtatc 90
>30380_ptr-mir-450a-2:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 48 gtattgggaacattttgcatgcataattttgtatc 82
|||||||| ||||||||||| |||| |||||||||
Sbjct: 56 gtattggggacattttgcattcatagttttgtatc 90
>26848_cfa-mir-450a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||| |||||||||||||| |||||||||
Sbjct: 52 tattgggagcattttgcatgcatggttttgtatc 85
>27182_eca-mir-450a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||| |||||||||||||| |||||||||
Sbjct: 52 tattgggagcattttgcatgcatggttttgtatc 85
>27909_mml-mir-450a-1:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||||||||||||||| || |||||||||
Sbjct: 52 tattgggaacattttgcatgtgtagttttgtatc 85
>31010_ppy-mir-450a-1:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||||||||||||||| ||| ||| |||||
Sbjct: 52 tattgggaacattttgcatgtatagtttggtatc 85
>33382_bta-mir-450-1:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||| |||||||||||||| |||||||||
Sbjct: 40 tattgggagcattttgcatgcatggttttgtatc 73
>34097_ssc-mir-450a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcatgcataattttgtatc 82
|||||||| |||||||||||||| |||||||||
Sbjct: 62 tattgggagcattttgcatgcatggttttgtatc 95
>34100_ssc-mir-450c:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 taagcgtattgggaacattttgcat 67
|||| ||||||||||||||||||||
Sbjct: 42 taagtgtattgggaacattttgcat 66
>34101_ssc-mir-450c:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 taagcgtattgggaacattttgcat 67
|||| ||||||||||||||||||||
Sbjct: 42 taagtgtattgggaacattttgcat 66
>32080_mmu-mir-450a-1:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcat 67
|||||||||||||||||||
Sbjct: 52 tattgggaacattttgcat 70
>32918_rno-mir-450a:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 tattgggaacattttgcat 67
|||||||||||||||||||
Sbjct: 52 tattgggaacattttgcat 70
