miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32919_rno-mir-451:mirbase
Length = 72
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttg 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
Query: 62 ctgctcccaca 72
|||||||||||
Sbjct: 62 ctgctcccaca 72
>33383_bta-mir-451:mirbase
Length = 71
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgctcc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
Query: 69 ca 70
||
Sbjct: 68 ca 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 aaccgttaccattactgagtttagtaatggtaacggtt 55
|||||||||||||||| | | ||||||||||||||||
Sbjct: 54 aaccgttaccattactaaactcagtaatggtaacggtt 17
>27185_eca-mir-451:mirbase
Length = 72
Score = 111 bits (56), Expect = 7e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 cttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctt 60
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 cttgggaatgtcgaggaaaccgttaccattactgtgtttagtaatggtaacggttctctt 60
Query: 61 gctg 64
||||
Sbjct: 61 gctg 64
>26850_cfa-mir-451:mirbase
Length = 69
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttg 61
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
Query: 62 ctg 64
|||
Sbjct: 61 ctg 63
>27913_mml-mir-451:mirbase
Length = 72
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 cttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaagggttctctt 60
Query: 61 gct 63
|||
Sbjct: 61 gct 63
>28661_hsa-mir-451:mirbase
Length = 72
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 cttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
Query: 61 gct 63
|||
Sbjct: 61 gct 63
>31014_ppy-mir-451:mirbase
Length = 72
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 cttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
Query: 61 gct 63
|||
Sbjct: 61 gct 63
>30382_ptr-mir-451:mirbase
Length = 71
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttg 61
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
Query: 62 ct 63
||
Sbjct: 61 ct 62
>28662_hsa-mir-451b:mirbase
Length = 68
Score = 105 bits (53), Expect = 4e-24
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 3 tgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgc 62
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 68 tgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgc 9
Query: 63 t 63
|
Sbjct: 8 t 8
>34102_ssc-mir-451:mirbase
Length = 65
Score = 105 bits (53), Expect = 4e-24
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgc 65
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tggcgagcaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgc 62
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 aaccgttaccattactgagtttagtaatggtaacggtt 55
|||||||||||||||| | | ||||||||||||||||
Sbjct: 52 aaccgttaccattactaaactcagtaatggtaacggtt 15
>31556_oan-mir-451:mirbase
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctggctg 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 aaccgttaccattactgagtttagtaatggtaacggtt 55
|||||||||||||||| | | ||||||||||||||||
Sbjct: 62 aaccgttaccattactaaactcagtaatggtaacggtt 25
>25862_xtr-mir-451:mirbase
Length = 62
Score = 87.7 bits (44), Expect = 9e-19
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 16 gaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgctc 67
||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 11 gaaaccgttaccattactgagtttagtaatggtaagggttctgttgctgctc 62
>26532_tgu-mir-451:mirbase
Length = 73
Score = 87.7 bits (44), Expect = 9e-19
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 10 ggcgaggaaaccgttaccattactgagtttagtaatggtaacggttct 57
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 aaccgttaccattactgagtttagtaatggtaacggtt 55
|||||||||||||||| | | ||||||||||||||||
Sbjct: 49 aaccgttaccattactaaactcagtaatggtaacggtt 12
>26030_gga-mir-451:mirbase
Length = 69
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 15 ggaaaccgttaccattactgagtttagtaatggtaacggttct 57
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 ggaaaccgttaccattactgagtttagtaatggtaacggttct 58
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 aaccgttaccattactgagtttagtaatggtaacggtt 55
|||||||||||||||| | | ||||||||||||||||
Sbjct: 56 aaccgttaccattactaaactcagtaatggtaacggtt 19
>27452_mdo-mir-451:mirbase
Length = 62
Score = 75.8 bits (38), Expect = 4e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 9 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctc 58
||||| |||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 2 tggcggggaaaccgttaccattactgtgtttagtaatggtaagggttctc 51
>34473_dre-mir-451:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 16 gaaaccgttaccattactgagtttagtaatggtaacggttct 57
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 gaaaccgttaccattactgagtttagtaatggtaagggttct 51
>25551_pma-mir-451:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 42 taatggtaacggttctcttgctgctccc 69
||||||||| ||||||||||||||||||
Sbjct: 43 taatggtaagggttctcttgctgctccc 70
