miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32090_mmu-mir-465a:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
Query: 61 agagtaaggcttac 74
||||||||||||||
Sbjct: 61 agagtaaggcttac 74
>32092_mmu-mir-465b-1:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
Query: 61 agagtaaggctta 73
|||||||||||||
Sbjct: 67 agagtaaggctta 79
>32093_mmu-mir-465b-1:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
Query: 61 agagtaaggctta 73
|||||||||||||
Sbjct: 67 agagtaaggctta 79
>32094_mmu-mir-465b-2:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
Query: 61 agagtaaggctta 73
|||||||||||||
Sbjct: 67 agagtaaggctta 79
>32095_mmu-mir-465b-2:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
Query: 61 agagtaaggctta 73
|||||||||||||
Sbjct: 67 agagtaaggctta 79
>32096_mmu-mir-465c-1:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaa--ataaaaaattgatcagggcctttctaa 58
||||||||||||||||| ||||| |||| || | |||||| ||||||||||||||||||
Sbjct: 7 gccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcctttctaa 66
Query: 59 gtagagtaaggctta 73
|||||||||||||||
Sbjct: 67 gtagagtaaggctta 81
>32097_mmu-mir-465c-1:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaa--ataaaaaattgatcagggcctttctaa 58
||||||||||||||||| ||||| |||| || | |||||| ||||||||||||||||||
Sbjct: 7 gccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcctttctaa 66
Query: 59 gtagagtaaggctta 73
|||||||||||||||
Sbjct: 67 gtagagtaaggctta 81
>32098_mmu-mir-465c-2:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaa--ataaaaaattgatcagggcctttctaa 58
||||||||||||||||| ||||| |||| || | |||||| ||||||||||||||||||
Sbjct: 7 gccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcctttctaa 66
Query: 59 gtagagtaaggctta 73
|||||||||||||||
Sbjct: 67 gtagagtaaggctta 81
>32099_mmu-mir-465c-2:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gccctatttagaatggcactgatgtgataaa--ataaaaaattgatcagggcctttctaa 58
||||||||||||||||| ||||| |||| || | |||||| ||||||||||||||||||
Sbjct: 7 gccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcctttctaa 66
Query: 59 gtagagtaaggctta 73
|||||||||||||||
Sbjct: 67 gtagagtaaggctta 81
>32922_rno-mir-465:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 40 ttgatcagggcctttctaagtagagtaaggctta 73
|||||||| |||||||| ||||||||||||||||
Sbjct: 44 ttgatcagtgcctttctgagtagagtaaggctta 77
>28137_mml-mir-890:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cctttctaagtagagtaaggctta 73
||||||| ||||||||||||||||
Sbjct: 49 cctttctgagtagagtaaggctta 72
