miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32093_mmu-mir-465b-1:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
Query: 61 ctaagtagagtaaggctta 79
|||||||||||||||||||
Sbjct: 61 ctaagtagagtaaggctta 79
>32094_mmu-mir-465b-2:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
Query: 61 ctaagtagagtaaggctta 79
|||||||||||||||||||
Sbjct: 61 ctaagtagagtaaggctta 79
>32095_mmu-mir-465b-2:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
Query: 61 ctaagtagagtaaggctta 79
|||||||||||||||||||
Sbjct: 61 ctaagtagagtaaggctta 79
>32096_mmu-mir-465c-1:mirbase
Length = 81
Score = 115 bits (58), Expect = 5e-27
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
|||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 59 ttctaagtagagtaaggctta 79
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32097_mmu-mir-465c-1:mirbase
Length = 81
Score = 115 bits (58), Expect = 5e-27
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
|||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 59 ttctaagtagagtaaggctta 79
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32098_mmu-mir-465c-2:mirbase
Length = 81
Score = 115 bits (58), Expect = 5e-27
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
|||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 59 ttctaagtagagtaaggctta 79
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32099_mmu-mir-465c-2:mirbase
Length = 81
Score = 115 bits (58), Expect = 5e-27
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
|||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 59 ttctaagtagagtaaggctta 79
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32090_mmu-mir-465a:mirbase
Length = 74
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
Query: 67 agagtaaggctta 79
|||||||||||||
Sbjct: 61 agagtaaggctta 73
>32091_mmu-mir-465a:mirbase
Length = 74
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 7 gccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggcctttctaagt 66
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 gccctatttagaatggcactgatgtgataaaataaaaaattgatcagggcctttctaagt 60
Query: 67 agagtaaggctta 79
|||||||||||||
Sbjct: 61 agagtaaggctta 73
>32922_rno-mir-465:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggtgctgatctgatgaaataaaaaattgatcagggccttt 60
|||| |||||||||||||| ||||||| | ||||||| || |||||||| ||||||
Sbjct: 1 tgcagtgccctatttagaacggtgctggtgtgatgaatgaagt--ttgatcagtgccttt 58
Query: 61 ctaagtagagtaaggctta 79
|| ||||||||||||||||
Sbjct: 59 ctgagtagagtaaggctta 77
>28137_mml-mir-890:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 cctttctaagtagagtaaggctta 79
||||||| ||||||||||||||||
Sbjct: 49 cctttctgagtagagtaaggctta 72
