miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32196_mmu-mir-509:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gtggttctttactccagaatgtggcaatcatgcataattaaatgtgattgacatttctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggttctttactccagaatgtggcaatcatgcataattaaatgtgattgacatttctgt 60
Query: 61 aatggagtaacacat 75
|||||||||||||||
Sbjct: 61 aatggagtaacacat 75
>27222_eca-mir-514:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 tggcaatcatgcataattaaatgtgattgaca 53
||||||||||| |||| |||||||||||||||
Sbjct: 30 tggcaatcatgtataactaaatgtgattgaca 61
>27221_eca-mir-509:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 21 gtggcaatcatgcataattaaatgtgattgaca 53
|||||||||||| ||||||||| |||||||||
Sbjct: 31 gtggcaatcatgtataattaaaaatgattgaca 63
>31068_ppy-mir-514-1:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 21 gtggcaatcatgcataattaaatgtgattgaca 53
|||||||||||| ||||||||| |||||||||
Sbjct: 33 gtggcaatcatgtgtaattaaatttgattgaca 65
>31069_ppy-mir-514-2:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 21 gtggcaatcatgcataattaaatgtgattgaca 53
|||||||||||| ||||||||| |||||||||
Sbjct: 28 gtggcaatcatgtgtaattaaatttgattgaca 60
>31070_ppy-mir-514-3:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 21 gtggcaatcatgcataattaaatgtgattgaca 53
|||||||||||| ||||||||| |||||||||
Sbjct: 28 gtggcaatcatgtgtaattaaatttgattgaca 60
>26873_cfa-mir-514:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 10 tactccagaatgtggcaatcatgcataattaaatgtgattgaca 53
||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 7 tactccagagagtggcaatcatttgtaattatatgtgattgaca 50
