miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32198_mmu-mir-511:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gatacccaccatgccttttgctctgcactcagtaaataataatttgtgaatgtgtagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatacccaccatgccttttgctctgcactcagtaaataataatttgtgaatgtgtagcaa 60
Query: 61 aagacaggatggggatcca 79
|||||||||||||||||||
Sbjct: 61 aagacaggatggggatcca 79
>32946_rno-mir-511:mirbase
Length = 79
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 gatacccaccatgccttttgctctgcactcagtaaataataatttgtgaatgtgtagcaa 60
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 gatacccaccatgccttttgctctgcactcagtacataatcatttgtgaatgtgtagcaa 60
Query: 61 aagacaggatggggatcca 79
|||||||||||||||||||
Sbjct: 61 aagacaggatggggatcca 79
>27954_mml-mir-511:mirbase
Length = 87
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 4 acccaccatgccttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaag 63
||||||| || ||||||||||||| |||||||||| | |||||||||||||||||||||
Sbjct: 9 acccaccttgtcttttgctctgcagtcagtaaatatttttttgtgaatgtgtagcaaaag 68
Query: 64 acaggatggggatcca 79
|||| |||||| ||||
Sbjct: 69 acagaatgggggtcca 84
>28714_hsa-mir-511-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
||||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 20 cttttgctctgcagtcagtaaatatttttttgtgaatgtgtagcaaaagacagaatgg 77
>28715_hsa-mir-511-2:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
||||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 20 cttttgctctgcagtcagtaaatatttttttgtgaatgtgtagcaaaagacagaatgg 77
>31058_ppy-mir-511-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
||||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 20 cttttgctctgcagtcagtaaatatttttttgtgaatgtgtagcaaaagacagaatgg 77
>31059_ppy-mir-511-2:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
||||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 20 cttttgctctgcagtcagtaaatatttttttgtgaatgtgtagcaaaagacagaatgg 77
>30417_ptr-mir-511:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 19 cttttgctctgcagtcagtaaatattttgttgtgaatgtgtagcaaaagacagaatgg 76
