miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32960_rno-mir-592:mirbase
Length = 96
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatattatgccatggcattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtca 60
Query: 61 tcacgtggtgacgcaacatcatgacgtaagacatca 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacgtggtgacgcaacatcatgacgtaagacatca 96
>28039_mml-mir-592:mirbase
Length = 97
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 64 cgtggtgacgcaacatcatgacgtaagac 92
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>28908_hsa-mir-592:mirbase
Length = 97
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 64 cgtggtgacgcaacatcatgacgtaagac 92
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>30527_ptr-mir-592:mirbase
Length = 96
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 64 cgtggtgacgcaacatcatgacgtaagac 92
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>31172_ppy-mir-592:mirbase
Length = 97
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 64 cgtggtgacgcaacatcatgacgtaagac 92
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>26888_cfa-mir-592:mirbase
Length = 95
Score = 174 bits (88), Expect = 7e-45
Identities = 95/96 (98%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtca 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtca 59
Query: 61 tcacgtggtgacgcaacatcatgacgtaagacatca 96
||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcacgtggtgacgcaacatcatgacgtaagacatca 95
>33432_bta-mir-592:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 88/89 (98%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatca 59
Query: 64 cgtggtgacgcaacatcatgacgtaagac 92
|||||||||||||||||||||||||||||
Sbjct: 60 cgtggtgacgcaacatcatgacgtaagac 88
>27240_eca-mir-592:mirbase
Length = 83
Score = 151 bits (76), Expect = 1e-37
Identities = 83/84 (98%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 6 ttatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatcacg 65
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ttatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatcacg 59
Query: 66 tggtgacgcaacatcatgacgtaa 89
||||||||||||||||||||||||
Sbjct: 60 tggtgacgcaacatcatgacgtaa 83
