miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26889_cfa-mir-599:mirbase
Length = 95
Score = 95.6 bits (48), Expect = 5e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| | | |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggattcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatgac 88
||||||||||||||||||||||||||||
Sbjct: 68 cagtttatcaaacccatacctggatgac 95
>33433_bta-mir-599:mirbase
Length = 95
Score = 95.6 bits (48), Expect = 5e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| ||| |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggactcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatgac 88
||||||||||||||||||| ||||||||
Sbjct: 68 cagtttatcaaacccatacgtggatgac 95
>28044_mml-mir-599:mirbase
Length = 95
Score = 87.7 bits (44), Expect = 1e-18
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| | | |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggattcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatgac 88
||||||||||||||||||| ||||||||
Sbjct: 68 cagtttatcaaacccatacttggatgac 95
>28914_hsa-mir-599:mirbase
Length = 95
Score = 87.7 bits (44), Expect = 1e-18
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| | | |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggattcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatgac 88
||||||||||||||||||| ||||||||
Sbjct: 68 cagtttatcaaacccatacttggatgac 95
>31178_ppy-mir-599:mirbase
Length = 95
Score = 87.7 bits (44), Expect = 1e-18
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| | | |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggattcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatgac 88
||||||||||||||||||| ||||||||
Sbjct: 68 cagtttatcaaacccatacttggatgac 95
>30533_ptr-mir-599:mirbase
Length = 94
Score = 85.7 bits (43), Expect = 5e-18
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 1 tgctgtccacagtgtatttgataagatgacataggagaggaacttctttcacctttgtgt 60
||||||||||||||| ||||||||| |||||| ||| ||| | | |||||| ||||||
Sbjct: 8 tgctgtccacagtgtgtttgataagctgacatgggacagggattcttttcactgttgtgt 67
Query: 61 cagtttatcaaacccatacctggatga 87
||||||||||||||||||| |||||||
Sbjct: 68 cagtttatcaaacccatacttggatga 94
>27459_mdo-mir-599:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 55 ttgtgtcagtttatcaaacccatacctggat 85
|||||||||||||||||||||||||||||||
Sbjct: 53 ttgtgtcagtttatcaaacccatacctggat 83
