miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32225_mmu-mir-615:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
Query: 61 ccgagcctgggtctccctcttccccccatccc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 ccgagcctgggtctccctcttccccccatccc 92
>32963_rno-mir-615:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
Query: 61 ccgagcctgggtctccctcttccccccatccc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 ccgagcctgggtctccctcttccccccatccc 92
>28930_hsa-mir-615:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
||||||||||||||||||||||||||||
Sbjct: 62 ccgagcctgggtctccctcttcccccca 89
>28931_hsa-mir-615:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
||||||||||||||||||||||||||||
Sbjct: 62 ccgagcctgggtctccctcttcccccca 89
>30545_ptr-mir-615:mirbase
Length = 95
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
||||||||||||||||||||||||||||
Sbjct: 62 ccgagcctgggtctccctcttcccccca 89
>28054_mml-mir-615:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcggaaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
||||||||||||||||||||||||||||
Sbjct: 62 ccgagcctgggtctccctcttcccccca 89
>28055_mml-mir-615:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcggaaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
||||||||||||||||||||||||||||
Sbjct: 62 ccgagcctgggtctccctcttcccccca 89
>27242_eca-mir-615:mirbase
Length = 97
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
Query: 62 cgagcctgggtctccctcttcccccc 87
||||||||||||||||||| ||||||
Sbjct: 64 cgagcctgggtctccctctccccccc 89
>27243_eca-mir-615:mirbase
Length = 97
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
Query: 62 cgagcctgggtctccctcttcccccc 87
||||||||||||||||||| ||||||
Sbjct: 64 cgagcctgggtctccctctccccccc 89
>33434_bta-mir-615:mirbase
Length = 93
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttccccc 86
|||||||||||||||||||| |||||
Sbjct: 62 ccgagcctgggtctccctctcccccc 87
>31193_ppy-mir-615:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggagggggttccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
|||||||||||||||| |||||||||||
Sbjct: 62 ccgagcctgggtctccgtcttcccccca 89
>31194_ppy-mir-615:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgggaggggcgggagggggttccccggtgctcggatctcgagggtgcttattgttcggt 61
Query: 61 ccgagcctgggtctccctcttcccccca 88
|||||||||||||||| |||||||||||
Sbjct: 62 ccgagcctgggtctccgtcttcccccca 89
>34124_ssc-mir-615:mirbase
Length = 88
Score = 155 bits (78), Expect = 7e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 3 gggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtcc 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaggggcgggagggggctccccggtgctcggatctcgagggtgcttattgttcggtcc 60
Query: 63 gagcctgggtctccctcttcccccca 88
|||||||||||||||||| |||||||
Sbjct: 61 gagcctgggtctccctctccccccca 86
>26890_cfa-mir-615:mirbase
Length = 85
Score = 131 bits (66), Expect = 9e-32
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggagctcgg-tctcgagggtgcttattgttcggt 59
Query: 61 ccgagcctgggtctccctcttccccc 86
||||||| |||||||||||| |||||
Sbjct: 60 ccgagcccgggtctccctctcccccc 85
