miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32229_mmu-mir-654:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 ctcggtaagtgggaagatggtaagctgcagaacatgtgtgtttctcatgtcatatgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggtaagtgggaagatggtaagctgcagaacatgtgtgtttctcatgtcatatgtctg 60
Query: 61 ctgaccatcacctttgggtctctg 84
||||||||||||||||||||||||
Sbjct: 61 ctgaccatcacctttgggtctctg 84
>33438_bta-mir-654:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 48 tgtcatatgtctgctgaccatcaccttt 75
||||||||||||||||||||||||||||
Sbjct: 46 tgtcatatgtctgctgaccatcaccttt 73
>28086_mml-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>28087_mml-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>28972_hsa-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>28973_hsa-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>30575_ptr-mir-654:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 48 catatgtctgctgaccatcaccttt 72
>31224_ppy-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>31225_ppy-mir-654:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 catatgtctgctgaccatcaccttt 75
|||||||||||||||||||||||||
Sbjct: 49 catatgtctgctgaccatcaccttt 73
>33872_oar-mir-654:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtcatatgtctgctgaccatcacc 72
||||||||||||||||||||||||
Sbjct: 60 gtcatatgtctgctgaccatcacc 83
>33873_oar-mir-654:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtcatatgtctgctgaccatcacc 72
||||||||||||||||||||||||
Sbjct: 60 gtcatatgtctgctgaccatcacc 83
