miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32970_rno-mir-665:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 agaacagggtctccttgaggggcctctgcctctatccaggattatgtttttatgaccagg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 agaacagggtctccttgaggggcctctgcctctatccaggattatctttttatgaccagg 60
Query: 61 aggctgaggtcccttacaggcggcctcttactct 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 aggctgaggtcccttacaggcggcctcttactct 94
>28105_mml-mir-665:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 10 tctccttgaggggcctctgcctctatccaggattatgtttttatgaccaggaggctgagg 69
|||||| |||||| ||||||||||| |||||| | | || ||||||||||||||||||
Sbjct: 1 tctcctcgaggggtctctgcctctacccaggactct---ttcatgaccaggaggctgagg 57
Query: 70 tcccttacaggcggc 84
|||| |||||||||
Sbjct: 58 cccctcacaggcggc 72
>28985_hsa-mir-665:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 10 tctccttgaggggcctctgcctctatccaggattatgtttttatgaccaggaggctgagg 69
|||||| |||||| ||||||||||| |||||| | | || ||||||||||||||||||
Sbjct: 1 tctcctcgaggggtctctgcctctacccaggactct---ttcatgaccaggaggctgagg 57
Query: 70 tcccttacaggcggc 84
|||| |||||||||
Sbjct: 58 cccctcacaggcggc 72
>30585_ptr-mir-665:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 atgaccaggaggctgaggtcccttacaggcggc 84
|||||||||||||||||| |||| |||||||||
Sbjct: 39 atgaccaggaggctgaggcccctcacaggcggc 71
