miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32973_rno-mir-668:mirbase
Length = 68
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 ggtaagtgtgcctcgggtgagcatgcacttaatgtaggtgtatgtcactcggctcggccc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ggtaagtgtgcctcgggtgagcatgcacttaacgtaggtgtatgtcactcggctcggccc 60
Query: 61 actacc 66
||||||
Sbjct: 61 actacc 66
>28106_mml-mir-668:mirbase
Length = 66
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ggtaagtgtgcctcgggtgagcatgcacttaatgtaggtgtatgtcactcggctcggccc 60
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtaagtgcgcctcgggtgagcatgcacttaatgtgggtgtatgtcactcggctcggccc 60
Query: 61 actacc 66
||||||
Sbjct: 61 actacc 66
>28986_hsa-mir-668:mirbase
Length = 66
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 ggtaagtgtgcctcgggtgagcatgcacttaatgtaggtgtatgtcactcggctcggccc 60
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtaagtgcgcctcgggtgagcatgcacttaatgtgggtgtatgtcactcggctcggccc 60
Query: 61 actacc 66
||||||
Sbjct: 61 actacc 66
>30586_ptr-mir-668:mirbase
Length = 65
Score = 113 bits (57), Expect = 1e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 2 gtaagtgtgcctcgggtgagcatgcacttaatgtaggtgtatgtcactcggctcggccca 61
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gtaagtgcgcctcgggtgagcatgcacttaatgtgggtgtatgtcactcggctcggccca 60
Query: 62 ctacc 66
|||||
Sbjct: 61 ctacc 65
>31232_ppy-mir-668:mirbase
Length = 67
Score = 109 bits (55), Expect = 2e-25
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 ggtaagtgtgcctcgggtgagcatgcacttaatgt-aggtgtatgtcactcggctcggcc 59
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtaagtgcgcctcgggtgagcatgcacttaatgtgaggtgtatgtcactcggctcggcc 60
Query: 60 cactacc 66
|||||||
Sbjct: 61 cactacc 67
