miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40023_ath-MIR161:mirbase
          Length = 173

 Score =  149 bits (75), Expect = 4e-37
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcattgaaagtgactacatcggggttccgannnnnnnngttcttcatatgatgaagcg 60
           ||||||||||||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 41  atgcattgaaagtgactacatcggggttccgattttttttgttcttcatatgatgaagcg 100

                                                  
Query: 61  gaaacagtaatcaaccctggtttagtcactttcactgca 99
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaaacagtaatcaaccctggtttagtcactttcactgca 139




>40022_ath-MIR161:mirbase
          Length = 173

 Score =  149 bits (75), Expect = 4e-37
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcattgaaagtgactacatcggggttccgannnnnnnngttcttcatatgatgaagcg 60
           ||||||||||||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 41  atgcattgaaagtgactacatcggggttccgattttttttgttcttcatatgatgaagcg 100

                                                  
Query: 61  gaaacagtaatcaaccctggtttagtcactttcactgca 99
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaaacagtaatcaaccctggtttagtcactttcactgca 139




>39811_aly-MIR161:mirbase
          Length = 122

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  atgcattgaaagtgactacatcggggtt 28
          ||||||||||||||||||||||||||||
Sbjct: 6  atgcattgaaagtgactacatcggggtt 33



 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 68  taatcaaccctggtttagtcactttcactgca 99
           |||||||||| |||||||||||||||||||||
Sbjct: 85  taatcaaccccggtttagtcactttcactgca 116




>39810_aly-MIR161:mirbase
          Length = 122

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  atgcattgaaagtgactacatcggggtt 28
          ||||||||||||||||||||||||||||
Sbjct: 6  atgcattgaaagtgactacatcggggtt 33



 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 68  taatcaaccctggtttagtcactttcactgca 99
           |||||||||| |||||||||||||||||||||
Sbjct: 85  taatcaaccccggtttagtcactttcactgca 116




>40262_bna-MIR161:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   gcattgaaagtgactacatc 22
           ||||||||||||||||||||
Sbjct: 116 gcattgaaagtgactacatc 97