miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33017_rno-mir-1912:mirbase
Length = 88
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 2 tagtctctaggatgtgctcattgcatgggctgtgtagatttttatttaatacacagaaca 61
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 3 tagtctctaggatgtgctcattgcatgggctatgtagatttctatttaatacacagaaca 62
Query: 62 tgcagtgagaacttgatagagattgg 87
||||||||||||||||||||||||||
Sbjct: 63 tgcagtgagaacttgatagagattgg 88
>33018_rno-mir-1912:mirbase
Length = 88
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 2 tagtctctaggatgtgctcattgcatgggctgtgtagatttttatttaatacacagaaca 61
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 3 tagtctctaggatgtgctcattgcatgggctatgtagatttctatttaatacacagaaca 62
Query: 62 tgcagtgagaacttgatagagattgg 87
||||||||||||||||||||||||||
Sbjct: 63 tgcagtgagaacttgatagagattgg 88
>27317_eca-mir-1912:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 5e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 6 ctctaggatgtgctcattgcatgggctgtgtagatttttatttaatacacagaacatgca 65
|||||||||||||||||||||||||||||||| ||||||||| ||||| |||| | ||||
Sbjct: 1 ctctaggatgtgctcattgcatgggctgtgtatatttttattcaatacccagagcgtgca 60
Query: 66 gtgagaacttgatagagatt 85
||| |||| | |||||||||
Sbjct: 61 gtgtgaacataatagagatt 80
>29194_hsa-mir-1912:mirbase
Length = 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 6 ctctaggatgtgctcattgcatgggctgtgtagatttttatttaatacacagaacatgca 65
|||||||||||||||||||||||||||||||| | | ||||| ||||| |||| ||||||
Sbjct: 1 ctctaggatgtgctcattgcatgggctgtgtatagtattattcaatacccagagcatgca 60
Query: 66 gtgagaacttgatagagatt 85
||| |||| | |||||||||
Sbjct: 61 gtgtgaacataatagagatt 80
>31378_ppy-mir-1912:mirbase
Length = 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 6 ctctaggatgtgctcattgcatgggctgtgtagatttttatttaatacacagaacatgca 65
|||||||||||||||||||||||||||||||| | | ||||| ||||| |||| ||||||
Sbjct: 1 ctctaggatgtgctcattgcatgggctgtgtatagtattattcaatacccagagcatgca 60
Query: 66 gtgagaacttgatagagatt 85
||| |||| | |||||||||
Sbjct: 61 gtgtgaacataatagagatt 80
