miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33129_bta-mir-15b:mirbase
Length = 98
Score = 184 bits (93), Expect = 8e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 6 accttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 accttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcat 65
Query: 66 tatttgctgctctagaaatttaaggaaattcat 98
|||||||||||||||||||||||||||||||||
Sbjct: 66 tatttgctgctctagaaatttaaggaaattcat 98
>27479_age-mir-15b:mirbase
Length = 98
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>27540_lla-mir-15b:mirbase
Length = 98
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>27651_mml-mir-15b:mirbase
Length = 98
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>28171_mne-mir-15b:mirbase
Length = 98
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacaatcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>26946_eca-mir-15b:mirbase
Length = 64
Score = 127 bits (64), Expect = 2e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
Query: 77 ctag 80
||||
Sbjct: 61 ctag 64
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 127 bits (64), Expect = 2e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
Query: 77 ctag 80
||||
Sbjct: 61 ctag 64
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 119 bits (60), Expect = 4e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 20 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgctcta 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgctcta 60
>25892_gga-mir-15b:mirbase
Length = 91
Score = 115 bits (58), Expect = 6e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||
Sbjct: 6 ccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcatt 65
Query: 67 atttgctgctctagaaatttaaggaa 92
|||||||||| |||||||||||||||
Sbjct: 66 atttgctgctttagaaatttaaggaa 91
>31426_oan-mir-15b:mirbase
Length = 130
Score = 99.6 bits (50), Expect = 4e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 20 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgctcta 79
||||||||||||||||||| ||| || || |||||||||||||||||||||||||| ||
Sbjct: 31 tagcagcacatcatggtttgcatggtatagccaagatgcgaatcattatttgctgcttta 90
Query: 80 gaaatttaaggaaa 93
||||||||||||||
Sbjct: 91 gaaatttaaggaaa 104
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aagtactgtagcagcacatcatggttt 38
|||| ||||||||||||||||||||||
Sbjct: 3 aagtgctgtagcagcacatcatggttt 29
>34204_dre-mir-15b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggttt 38
||||||||||||||||||||||
Sbjct: 36 ctgtagcagcacatcatggttt 57
>25893_gga-mir-15c:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 9 tgtagcagcacatcatggttt 29
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 12 tgtagcagcacatcatggttt 32
>31427_oan-mir-15c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 26 tgtagcagcacatcatggttt 46
