miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31751_cgr-mir-21:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
Query: 61 gcagtcgatgggctgtctgacattttggtatc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtcgatgggctgtctgacattttggtatc 92
>33923_ssc-mir-21:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
Query: 61 gcagtcgatgggctgtctgacattttggtatc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtcgatgggctgtctgacattttggtatc 92
>31787_mmu-mir-21:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaccaccttgtcggatagcttatcagactgatgttgactgttgaatctcatggcaaca 60
Query: 61 gcagtcgatgggctgtctgacattttggtatc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtcgatgggctgtctgacattttggtatc 92
>26957_eca-mir-21:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>33141_bta-mir-21:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>27488_age-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>27663_mml-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>28180_mne-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>28268_ggo-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>28372_hsa-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>30052_ppa-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>30159_ptr-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>30764_ppy-mir-21:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacaccagtcgatg 60
Query: 71 ggctgtctgaca 82
||||||||||||
Sbjct: 61 ggctgtctgaca 72
>25905_gga-mir-21:mirbase
Length = 97
Score = 127 bits (64), Expect = 1e-30
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 1 tgtaccaccttgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaaca 60
||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 tgtaccatcctgtcggatagcttatcagactgatgttgactgttggatctcatggcaaca 60
Query: 61 gcagtcgatgggctgtctgacattttggtatc 92
|||||| | ||||||||||||||||||||||
Sbjct: 61 acagtcggtaggctgtctgacattttggtatc 92
>31438_oan-mir-21:mirbase
Length = 114
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 13 tcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatggg 72
|||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 24 tcggatagcttatcagactgatgttgactgttagatctcctggcaacagcagtcgatggg 83
Query: 73 ctgtctgacattttggtatc 92
||||||||||||||||||||
Sbjct: 84 ctgtctgacattttggtatc 103
>27341_mdo-mir-21:mirbase
Length = 74
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgtcggatagcttatcagactgatgttgactgttggatctcatggcaacagcagtcgatg 60
Query: 71 ggctgtctgacatt 84
|||||||||||||
Sbjct: 61 agctgtctgacatt 74
>26635_cfa-mir-21:mirbase
Length = 60
Score = 119 bits (60), Expect = 4e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 18 tagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatgggctgtc 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatgggctgtc 60
>26411_tgu-mir-21:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 1e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 11 tgtcgggtagcttatcagactgatgttgactgttgaatctcatggcaacagcagtcgatg 70
|||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |
Sbjct: 4 tgtcggatagcttatcagactgatgttgactgttggatctcatggcaacaacagtcggta 63
Query: 71 ggctgtctg 79
|||||||||
Sbjct: 64 ggctgtctg 72
>34221_dre-mir-21-2:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 7e-05
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 53 tggcaacagcagtcga-tgggctgtctgacattttgg 88
|||||||||||||| | | ||||||||||||||||||
Sbjct: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
