miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31806_mmu-mir-30a:mirbase
Length = 71
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>28278_ggo-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>28279_ggo-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>28391_hsa-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30066_ppa-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30065_ppa-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30176_ptr-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30177_ptr-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30781_ppy-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>30782_ppy-mir-30a:mirbase
Length = 71
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>27680_mml-mir-30a:mirbase
Length = 71
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccatagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>27681_mml-mir-30a:mirbase
Length = 71
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagccatagatgggctttcagtcggatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>26653_cfa-mir-30a:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctcgactggaagctgtgaagccacagatgggctttcagtcggatgtttgc 60
Query: 66 agc 68
|||
Sbjct: 61 agc 63
>25915_gga-mir-30a:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 1e-21
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgtt 62
||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgtt 63
Query: 63 tgcagctgc 71
|||||||||
Sbjct: 64 tgcagctgc 72
>25916_gga-mir-30a:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 1e-21
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgtt 62
||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgtt 63
Query: 63 tgcagctgc 71
|||||||||
Sbjct: 64 tgcagctgc 72
>31450_oan-mir-30a:mirbase
Length = 137
Score = 97.6 bits (49), Expect = 1e-21
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgtt 62
||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 29 actgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgtt 88
Query: 63 tgcagctgc 71
|||||||||
Sbjct: 89 tgcagctgc 97
>27356_mdo-mir-30a:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgttt 63
|||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgttt 64
Query: 64 gcagctgc 71
||||||||
Sbjct: 65 gcagctgc 72
>26423_tgu-mir-30b:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 2e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgtt 62
||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 9 actgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgtt 68
Query: 63 tgcag 67
|||||
Sbjct: 69 tgcag 73
>26424_tgu-mir-30b:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 2e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaat-gggctttcagtcggatgtt 62
||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 9 actgtaaacatcctcgactggaagctgtgaagcagcagatggggctttcagtcggatgtt 68
Query: 63 tgcag 67
|||||
Sbjct: 69 tgcag 73
>33164_bta-mir-30a:mirbase
Length = 67
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttg 64
||||||||||||||||||||||||||||| || || | ||||||||||||||||||||
Sbjct: 1 ctgtaaacatcctcgactggaagctgtgaggctgcagaaaggctttcagtcggatgtttg 60
Query: 65 cagctgc 71
|||||||
Sbjct: 61 cagctgc 67
>25731_xtr-mir-30a:mirbase
Length = 71
Score = 79.8 bits (40), Expect = 2e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagcagttgaagggctttcagtcagatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>25732_xtr-mir-30a:mirbase
Length = 71
Score = 79.8 bits (40), Expect = 2e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgttt 63
||||||||||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 4 actgtaaacatcctcgactggaagctgtgaagcagttgaagggctttcagtcagatgttt 63
Query: 64 gcagctgc 71
||||||||
Sbjct: 64 gcagctgc 71
>33938_ssc-mir-30a:mirbase
Length = 107
Score = 79.8 bits (40), Expect = 2e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttg 64
||||||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 20 ctgtaaacatcctcgactggaagctgtgaggctgaagacgggctttcagtcggatgtttg 79
Query: 65 cagc 68
||||
Sbjct: 80 cagc 83
>33939_ssc-mir-30a:mirbase
Length = 107
Score = 79.8 bits (40), Expect = 2e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttg 64
||||||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 20 ctgtaaacatcctcgactggaagctgtgaggctgaagacgggctttcagtcggatgtttg 79
Query: 65 cagc 68
||||
Sbjct: 80 cagc 83
>25457_pma-mir-30c:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 gcaactgtaaacatcctcgactggaagctgtg 32
||||||||||||||||||||||| ||||||||
Sbjct: 8 gcaactgtaaacatcctcgactgaaagctgtg 39
>25737_xtr-mir-30e:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaa 34
||||||||||||| ||||||||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagctgtgaa 45
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagctgc 71
|||||||||||||||||| |||||||
Sbjct: 58 gctttcagtcggatgtttacagctgc 83
>33945_ssc-mir-30e:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtga 33
|||||||||||||| |||||||||||||||
Sbjct: 7 actgtaaacatccttgactggaagctgtga 36
>33946_ssc-mir-30e:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgtga 33
|||||||||||||| |||||||||||||||
Sbjct: 7 actgtaaacatccttgactggaagctgtga 36
>25736_xtr-mir-30d:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtga 33
|||||||||||| ||||||||||||||||
Sbjct: 10 ctgtaaacatccccgactggaagctgtga 38
>25921_gga-mir-30e:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtga 33
||||||||||||| |||||||||||||||
Sbjct: 18 ctgtaaacatccttgactggaagctgtga 46
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 gggctttcagtcggatgtttgcagctgc 71
|||||||||||||||||||| |||||||
Sbjct: 58 gggctttcagtcggatgtttacagctgc 85
>31810_mmu-mir-30d:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttg 64
|||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 11 ctgtaaacatccccgactggaagctgt-aagccacagccaagctttcagtcagatgtttg 69
Query: 65 c 65
|
Sbjct: 70 c 70
>32692_rno-mir-30d:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttg 64
|||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 11 ctgtaaacatccccgactggaagctgt-aagccacagccaagctttcagtcagatgtttg 69
Query: 65 c 65
|
Sbjct: 70 c 70
>25455_pma-mir-30a:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagc 28
||||||||||||||||||||||||
Sbjct: 8 ctgtaaacatcctcgactggaagc 31
>26658_cfa-mir-30e:mirbase
Length = 64
Score = 48.1 bits (24), Expect = 8e-07
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaag-ccacaaatgggctttcagtcggatgtttg 64
|||||||||||| ||||||||||||| | | | || | ||||||||||||||||||||
Sbjct: 1 tgtaaacatccttgactggaagctgtaaggtgctcagaggggctttcagtcggatgttta 60
Query: 65 cagc 68
||||
Sbjct: 61 cagc 64
>26978_eca-mir-30d:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtga 33
||||||||||| ||||||||||||||||
Sbjct: 7 tgtaaacatccccgactggaagctgtga 34
>26979_eca-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>27685_mml-mir-30d:mirbase
Length = 69
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 5 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 63
>27686_mml-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>28193_mne-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>28281_ggo-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>28395_hsa-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>28396_hsa-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>30068_ppa-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>30181_ptr-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>30182_ptr-mir-30e:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 14 actgtaaacatccttgactggaagctgt 41
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 57 gctttcagtcggatgtttacagc 79
>30785_ppy-mir-30d:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgtgaagccacaaatgggctttcagtcggatgtttgc 65
||||||||||| |||||||||||||| ||| |||| | |||||||||| |||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt-aagacacagctaagctttcagtcagatgtttgc 64
>30786_ppy-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>31811_mmu-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>32693_rno-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>33169_bta-mir-30e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctgt 31
|||||||||||||| |||||||||||||
Sbjct: 15 actgtaaacatccttgactggaagctgt 42
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||| ||||
Sbjct: 58 gctttcagtcggatgtttacagc 80
>34250_dre-mir-30d:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgtg 32
|||||||||||| |||||||||||||||
Sbjct: 34 ctgtaaacatccccgactggaagctgtg 61
>25920_gga-mir-30d:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 5 ctgtaaacatccccgactggaagctgt 31
>26427_tgu-mir-30d:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 2 ctgtaaacatccccgactggaagctgt 28
>26428_tgu-mir-30d:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 2 ctgtaaacatccccgactggaagctgt 28
>31453_oan-mir-30d:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 28 ctgtaaacatccccgactggaagctgt 54
>31454_oan-mir-30e:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctg 30
|||||||||||||| ||||||||||||
Sbjct: 14 actgtaaacatccttgactggaagctg 40
>34251_dre-mir-30e-2:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 actgtaaacatcctcgactggaagctg 30
|||||||||||||| ||||||||||||
Sbjct: 9 actgtaaacatccttgactggaagctg 35
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 gctttcagtcggatgtttgcagc 68
|||||||||||||||||||||||
Sbjct: 50 gctttcagtcggatgtttgcagc 72
>34575_fru-mir-30d:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 20 ctgtaaacatccccgactggaagctgt 46
>34722_tni-mir-30d:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctgt 31
|||||||||||| ||||||||||||||
Sbjct: 14 ctgtaaacatccccgactggaagctgt 40
>25458_pma-mir-30d:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctg 30
|||||||||||| |||||||||||||
Sbjct: 11 ctgtaaacatccacgactggaagctg 36
>26421_tgu-mir-30a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctg 30
||||||||||||| ||||||||||||
Sbjct: 19 ctgtaaacatccttgactggaagctg 44
>26422_tgu-mir-30a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ctgtaaacatcctcgactggaagctg 30
||||||||||||| ||||||||||||
Sbjct: 19 ctgtaaacatccttgactggaagctg 44
>33168_bta-mir-30d:mirbase
Length = 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgt 31
||||||||||| ||||||||||||||
Sbjct: 6 tgtaaacatccccgactggaagctgt 31
>33944_ssc-mir-30d:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctgt 31
||||||||||| ||||||||||||||
Sbjct: 8 tgtaaacatccccgactggaagctgt 33
>26657_cfa-mir-30d:mirbase
Length = 60
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tgtaaacatcctcgactggaagctg 30
||||||||||| |||||||||||||
Sbjct: 1 tgtaaacatccccgactggaagctg 25
